DXS-RXN
Revision as of 11:15, 17 October 2022 by Bot 1 (talk | contribs) (Created page with "Category:reaction == Reaction DXS-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.2.1.7 ec-2.2.1.7] * direction: ** left-to-right * common-name: ** 1-deoxy-d-xylulos...")
Contents
Reaction DXS-RXN
- ec-number:
- direction:
- left-to-right
- common-name:
- 1-deoxy-d-xylulose-5-phosphate synthase
Reaction formula
- 1 GAP[c] + 1 PROTON[c] + 1 PYRUVATE[c] => 1 CARBON-DIOXIDE[c] + 1 DEOXYXYLULOSE-5P[c]
Gene(s) associated with this reaction
- Gene: FISUC_RS13715
- Category: annotation
- Source: fibrobacter_succinogenes2, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: FISUC_RS08240
- Category: annotation
- Source: fibrobacter_succinogenes2, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: ecoli, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: faecalibacterium, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: plantarum, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: bthetaiotaomicron, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: FSU_RS10170
- Category: annotation
- Source: fibrobacter_succinogenes1, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: ecoli, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: faecalibacterium, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: plantarum, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: bthetaiotaomicron, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: FSU_RS15690
- Category: annotation
- Source: fibrobacter_succinogenes1, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: faecalibacterium, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: plantarum, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: bthetaiotaomicron, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PYRIDOXSYN-PWY, pyridoxal 5'-phosphate biosynthesis I:
- 4 reactions found over 7 reactions in the full pathway
- NONMEVIPP-PWY, methylerythritol phosphate pathway I:
- 9 reactions found over 9 reactions in the full pathway
- PWY-7560, methylerythritol phosphate pathway II:
- 9 reactions found over 9 reactions in the full pathway
- PWY-6892, thiazole biosynthesis I (facultative anaerobic bacteria):
- 5 reactions found over 7 reactions in the full pathway
- PWY-6891, thiazole biosynthesis II (aerobic bacteria):
- 4 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: annotation; source: fibrobacter_succinogenes2; tool: pathwaytools; comment: n.a
- category: orthology; source: plantarum; tool: orthofinder; comment: n.a
- category: orthology; source: ecoli; tool: orthofinder; comment: n.a
- category: orthology; source: faecalibacterium; tool: orthofinder; comment: n.a
- category: orthology; source: bthetaiotaomicron; tool: orthofinder; comment: n.a
- category: annotation; source: fibrobacter_succinogenes1; tool: pathwaytools; comment: n.a
External links
