Difference between revisions of "RXN-17824"

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(Created page with "Category:reaction == Reaction ISPH2-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.17.7.4 ec-1.17.7.4] * direction: ** left-to-right * common-name: ** 4-hydroxy-3-m...")
 
(Created page with "Category:reaction == Reaction SUCCGLUALDDEHYD-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.71 ec-1.2.1.71] * direction: ** left-to-right == Reaction formula =...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction ISPH2-RXN ==
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== Reaction SUCCGLUALDDEHYD-RXN ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.17.7.4 ec-1.17.7.4]
+
** [http://enzyme.expasy.org/EC/1.2.1.71 ec-1.2.1.71]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[HYDROXY-METHYL-BUTENYL-DIP]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c]
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* 1 [[CPD-822]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[N2-SUCCINYLGLUTAMATE]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FISUC_RS09730]]
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* Gene: [[FSU_RS01755]]
** Category: [[annotation]]
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** Category: [[orthology]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
* Gene: [[FSU_RS11675]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7560]], methylerythritol phosphate pathway II:
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* [[AST-PWY]], L-arginine degradation II (AST pathway):
** '''9''' reactions found over '''9''' reactions in the full pathway
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** '''3''' reactions found over '''5''' reactions in the full pathway
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I:
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24490 24490]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10812 10812]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R08209 R08209]
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** [http://www.genome.jp/dbget-bin/www_bget?R05049 R05049]
** [http://www.genome.jp/dbget-bin/www_bget?R05884 R05884]
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{{#set: ec-number=ec-1.2.1.71}}
{{#set: ec-number=ec-1.17.7.4}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=4-hydroxy-3-methylbut-2-enyl diphosphate reductase}}
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{{#set: nb gene associated=1}}
{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=1}}
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=orthofinder}}
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=genome}}
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{{#set: reconstruction source=ecoli}}

Revision as of 21:58, 24 July 2020

Reaction SUCCGLUALDDEHYD-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • AST-PWY, L-arginine degradation II (AST pathway):
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links