Difference between revisions of "RXN-17824"

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(Created page with "Category:reaction == Reaction PGLUCISOM-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/5.3.1.9 ec-5.3.1.9] * direction: ** reversible * common-name: ** glucose-6-phos...")
(Created page with "Category:reaction == Reaction RXN-13158 == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.85 ec-1.1.1.85] * direction: ** left-to-right * common-name: ** 3-isopropylma...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PGLUCISOM-RXN ==
+
== Reaction RXN-13158 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.3.1.9 ec-5.3.1.9]
+
** [http://enzyme.expasy.org/EC/1.1.1.85 ec-1.1.1.85]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** glucose-6-phosphate isomerase
+
** 3-isopropylmalate dehydrogenase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[D-glucopyranose-6-phosphate]][c] '''<=>''' 1 [[FRUCTOSE-6P]][c]
+
* 1 [[2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FISUC_RS06000]]
+
* Gene: [[FSU_RS15260]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FSU_RS07900]]
+
* Gene: [[FISUC_RS13280]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* [[PWY-7238]], sucrose biosynthesis II:
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-622]], starch biosynthesis:
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5054]], D-sorbitol biosynthesis I:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[P124-PWY]], Bifidobacterium shunt:
 
−
** '''14''' reactions found over '''15''' reactions in the full pathway
 
−
* [[UDPNACETYLGALSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis II:
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[UDPNAGSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis I:
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[P122-PWY]], heterolactic fermentation:
 
−
** '''17''' reactions found over '''18''' reactions in the full pathway
 
−
* [[RUMP-PWY]], formaldehyde oxidation I:
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6992]], 1,5-anhydrofructose degradation:
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5514]], UDP-N-acetyl-D-galactosamine biosynthesis II:
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-8013]], UDP-N-acetyl-D-galactosamine biosynthesis III:
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[SUCSYN-PWY]], sucrose biosynthesis I (from photosynthesis):
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose):
 
−
** '''11''' reactions found over '''11''' reactions in the full pathway
 
−
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate):
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-3801]], sucrose degradation II (sucrose synthase):
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5384]], sucrose degradation IV (sucrose phosphorylase):
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY66-399]], gluconeogenesis III:
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[P341-PWY]], glycolysis V (Pyrococcus):
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-621]], sucrose degradation III (sucrose invertase):
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[GLUCONEO-PWY]], gluconeogenesis I:
 
−
** '''11''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum):
 
−
** '''9''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5659]], GDP-mannose biosynthesis:
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6981]], chitin biosynthesis:
 
−
** '''4''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered):
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7347]], sucrose biosynthesis III:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
</div>
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11819 11819]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32272 32272]
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-1.1.1.85}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00771 R00771]
+
{{#set: direction=left-to-right}}
−
* UNIPROT:
+
{{#set: common-name=3-isopropylmalate dehydrogenase}}
−
** [http://www.uniprot.org/uniprot/P06744 P06744]
 
−
** [http://www.uniprot.org/uniprot/P28718 P28718]
 
−
** [http://www.uniprot.org/uniprot/Q7LZP0 Q7LZP0]
 
−
** [http://www.uniprot.org/uniprot/O83488 O83488]
 
−
** [http://www.uniprot.org/uniprot/Q9JTW1 Q9JTW1]
 
−
** [http://www.uniprot.org/uniprot/Q59000 Q59000]
 
−
** [http://www.uniprot.org/uniprot/Q9PMD4 Q9PMD4]
 
−
** [http://www.uniprot.org/uniprot/O25781 O25781]
 
−
** [http://www.uniprot.org/uniprot/O84382 O84382]
 
−
** [http://www.uniprot.org/uniprot/Q9JSS6 Q9JSS6]
 
−
** [http://www.uniprot.org/uniprot/P81181 P81181]
 
−
** [http://www.uniprot.org/uniprot/P08059 P08059]
 
−
** [http://www.uniprot.org/uniprot/P50309 P50309]
 
−
** [http://www.uniprot.org/uniprot/P13376 P13376]
 
−
** [http://www.uniprot.org/uniprot/P13375 P13375]
 
−
** [http://www.uniprot.org/uniprot/P12709 P12709]
 
−
** [http://www.uniprot.org/uniprot/P0A6T1 P0A6T1]
 
−
** [http://www.uniprot.org/uniprot/P06745 P06745]
 
−
** [http://www.uniprot.org/uniprot/P13377 P13377]
 
−
** [http://www.uniprot.org/uniprot/P12341 P12341]
 
−
** [http://www.uniprot.org/uniprot/P18240 P18240]
 
−
** [http://www.uniprot.org/uniprot/P29333 P29333]
 
−
** [http://www.uniprot.org/uniprot/P34796 P34796]
 
−
** [http://www.uniprot.org/uniprot/P34797 P34797]
 
−
** [http://www.uniprot.org/uniprot/P54240 P54240]
 
−
** [http://www.uniprot.org/uniprot/P54242 P54242]
 
−
** [http://www.uniprot.org/uniprot/Q59088 Q59088]
 
−
** [http://www.uniprot.org/uniprot/P78033 P78033]
 
−
** [http://www.uniprot.org/uniprot/P52983 P52983]
 
−
** [http://www.uniprot.org/uniprot/P49105 P49105]
 
−
** [http://www.uniprot.org/uniprot/P42862 P42862]
 
−
** [http://www.uniprot.org/uniprot/P42863 P42863]
 
−
** [http://www.uniprot.org/uniprot/Q9SB57 Q9SB57]
 
−
** [http://www.uniprot.org/uniprot/O82058 O82058]
 
−
** [http://www.uniprot.org/uniprot/O82059 O82059]
 
−
** [http://www.uniprot.org/uniprot/O61113 O61113]
 
−
** [http://www.uniprot.org/uniprot/P78917 P78917]
 
−
** [http://www.uniprot.org/uniprot/Q9RMC1 Q9RMC1]
 
−
** [http://www.uniprot.org/uniprot/Q9X670 Q9X670]
 
−
</div>
 
−
{{#set: ec-number=ec-5.3.1.9}}
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=glucose-6-phosphate isomerase}}
 
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=25}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=genome}}
 
{{#set: reconstruction source=genome}}

Revision as of 10:07, 10 September 2020

Reaction RXN-13158

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • 3-isopropylmalate dehydrogenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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