Difference between revisions of "RXN-17824"

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(Created page with "Category:reaction == Reaction RXN-1404 == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.5.1 ec-3.5.5.1] * direction: ** left-to-right * common-name: ** nitrilase == Rea...")
(Created page with "Category:reaction == Reaction RXN0-4261 == * ec-number: ** [http://enzyme.expasy.org/EC/5.6.2.c ec-5.6.2.c] * direction: ** left-to-right * common-name: ** replicative dna...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-1404 ==
+
== Reaction RXN0-4261 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.5.1 ec-3.5.5.1]
+
** [http://enzyme.expasy.org/EC/5.6.2.c ec-5.6.2.c]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** nitrilase
+
** replicative dna helicase
 +
** uvrd-helicase domain-containing protein
 +
** helicase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[INDOLEYL-CPD]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INDOLE_ACETATE_AUXIN]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[Supercoiled-Duplex-DNAs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 2 [[Single-Stranded-DNAs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FISUC_RS02085]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[FISUC_RS03735]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
−
* Gene: [[FSU_RS03965]]
+
* Gene: [[FISUC_RS01385]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FISUC_RS12830]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FISUC_RS12770]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FSU_RS03265]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FSU_RS07800]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FSU_RS14805]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FSU_RS14745]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FSU_RS05625]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FSU_RS10840]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FISUC_RS08900]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FISUC_RS05900]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWYQT-4476]], indole glucosinolate activation (herbivore attack):
 
−
** '''1''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-581]], indole-3-acetate biosynthesis II:
 
−
** '''2''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-5026]], indole-3-acetate biosynthesis V (bacteria and fungi):
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: ec-number=ec-5.6.2.c}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=45777 45777]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03093 R03093]
 
−
{{#set: ec-number=ec-3.5.5.1}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=nitrilase}}
+
{{#set: common-name=replicative dna helicase|helicase|uvrd-helicase domain-containing protein}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=12}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=genome}}
 
{{#set: reconstruction source=genome}}

Revision as of 11:57, 15 January 2021

Reaction RXN0-4261

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • replicative dna helicase
    • uvrd-helicase domain-containing protein
    • helicase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=RXN-17824&oldid=66041"