Difference between revisions of "RXN-17824"

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(Created page with "Category:reaction == Reaction RXN1G-469 == * common-name: ** 3-oxobehenoyl-[acyl-carrier protein] reductase ** 3-oxoacyl-acp reductase fabg ** 3-oxoacyl-[acyl-carrier-prot...")
(Created page with "Category:reaction == Reaction RXN-16659 == * common-name: ** peptidoglycan transpeptidase (gram-negative bacteria) ** d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanin...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN1G-469 ==
+
== Reaction RXN-16659 ==
 
* common-name:
 
* common-name:
−
** 3-oxobehenoyl-[acyl-carrier protein] reductase
+
** peptidoglycan transpeptidase (gram-negative bacteria)
−
** 3-oxoacyl-acp reductase fabg
+
** d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase
−
** 3-oxoacyl-[acyl-carrier-protein] reductase
+
** penicillin-binding protein 2
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
+
** [http://enzyme.expasy.org/EC/3.4.16.4 ec-3.4.16.4]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-oxo-behenoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-hydroxybehenoyl-ACPs]][c]
+
* 1 [[CPD-17927]][c] '''+''' 1 [[CPD-17931]][c] '''=>''' 1 [[CPD-17932]][c] '''+''' 1 [[D-ALANINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS01260]]
+
* Gene: [[FISUC_RS08120]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS09490]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS11430]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FSU_RS12065]]
+
* Gene: [[FSU_RS10050]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FISUC_RS15070]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[FISUC_RS10110]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWYG-321]], mycolate biosynthesis:
+
* [[PWY0-1586]], peptidoglycan maturation (meso-diaminopimelate containing):
−
** '''12''' reactions found over '''182''' reactions in the full pathway
+
** '''4''' reactions found over '''12''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
{{#set: common-name=3-oxobehenoyl-[acyl-carrier protein] reductase|3-oxoacyl-[acyl-carrier-protein] reductase|3-oxoacyl-acp reductase fabg}}
+
{{#set: common-name=penicillin-binding protein 2|peptidoglycan transpeptidase (gram-negative bacteria)|d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase}}
−
{{#set: ec-number=ec-1.1.1.100}}
+
{{#set: ec-number=ec-3.4.16.4}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
 
{{#set: nb gene associated=4}}
 
{{#set: nb gene associated=4}}

Revision as of 07:52, 17 October 2022

Reaction RXN-16659

  • common-name:
    • peptidoglycan transpeptidase (gram-negative bacteria)
    • d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase
    • penicillin-binding protein 2
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1586, peptidoglycan maturation (meso-diaminopimelate containing):
    • 4 reactions found over 12 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=RXN-17824&oldid=87810"