Difference between revisions of "RXN-17824"

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(Created page with "Category:reaction == Reaction RXN-16659 == * common-name: ** peptidoglycan transpeptidase (gram-negative bacteria) ** d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanin...")
(Created page with "Category:reaction == Reaction RXN-17824 == * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.63 ec-2.1.1.63] * direction: ** left-to-right * common-name: ** methylated-dn...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-16659 ==
+
== Reaction RXN-17824 ==
* common-name:
 
** peptidoglycan transpeptidase (gram-negative bacteria)
 
** d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase
 
** penicillin-binding protein 2
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.4.16.4 ec-3.4.16.4]
+
** [http://enzyme.expasy.org/EC/2.1.1.63 ec-2.1.1.63]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** methylated-dna--[protein]-cysteine s-methyltransferase
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-17927]][c] '''+''' 1 [[CPD-17931]][c] '''=>''' 1 [[CPD-17932]][c] '''+''' 1 [[D-ALANINE]][c]
+
* 1 [[CPD-19186]][c] '''+''' 1 [[PROT-CYS]][c] '''=>''' 1 [[Protein-S-methyl-L-cysteine]][c] '''+''' 1 [[a-thymine-in-DNA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FISUC_RS08120]]
+
* Gene: [[FSU_RS01115]]
** Category: [[annotation]]
 
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[FISUC_RS09490]]
 
** Category: [[annotation]]
 
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[FSU_RS11430]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
* Gene: [[FSU_RS10050]]
+
* Gene: [[FISUC_RS14925]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY0-1586]], peptidoglycan maturation (meso-diaminopimelate containing):
 
** '''4''' reactions found over '''12''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
{{#set: common-name=penicillin-binding protein 2|peptidoglycan transpeptidase (gram-negative bacteria)|d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase}}
+
* RHEA:
{{#set: ec-number=ec-3.4.16.4}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=53429 53429]
 +
{{#set: ec-number=ec-2.1.1.63}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=4}}
+
{{#set: common-name=methylated-dna--[protein]-cysteine s-methyltransferase}}
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}
 
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}

Latest revision as of 11:18, 17 October 2022

Reaction RXN-17824

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • methylated-dna--[protein]-cysteine s-methyltransferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links


Property "Common-name" (as page type) with input value "methylated-dna--[protein]-cysteine s-methyltransferase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.