Difference between revisions of "RXN-8768"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction ATPSYN-RXN == * direction: ** reversible * common-name: ** atp synthase f1 subunit gamma ** f0f1 atp synthase subunit a ** atp synthase f0 su...")
 
(Created page with "Category:reaction == Reaction RXN-8768 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/5.4.99.60 ec-5.4.99.60] == Reaction formula == * 1 C...")
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ATPSYN-RXN ==
+
== Reaction RXN-8768 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** atp synthase f1 subunit gamma
 
−
** f0f1 atp synthase subunit a
 
−
** atp synthase f0 subunit b
 
−
** atp synthase f0 subunit c
 
−
** atp synthase f1 subunit epsilon
 
−
** f0f1 atp synthase subunit beta
 
−
** f0f1 atp synthase subunit alpha
 
−
** v-type atp synthase subunit i
 
−
** v-type atp synthase subunit f
 
−
** h+-transporting two-sector atpase subunit e
 
−
** v-type atp synthase subunit k
 
−
** v-type atp synthase subunit d
 
−
** v-type atp synthase subunit b
 
−
** v-type atp synthase subunit a
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.6.3.14 ec-3.6.3.14]
+
** [http://enzyme.expasy.org/EC/5.4.99.60 ec-5.4.99.60]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ADP]][c] '''+''' 4 [[PROTON]][e] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[ATP]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[CPD-9045]][c] '''=>''' 1 [[CPD-9049]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[RUMFLAFD1_RS0101365]]
−
* Gene: [[RUMFLAFD1_RS0107500]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[RUMFLAFD1_RS0107510]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[RUMFLAFD1_RS0106665]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[RUMFLAFD1_RS0107530]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[RUMFLAFD1_RS0108910]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[RUMFLAFD1_RS0108905]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[RUMFLAFD1_RS0108930]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[RUMFLAFD1_RS0108900]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[RUMFLAFD1_RS0108915]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[RUMFLAFD1_RS0107515]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[RUMFLAFD1_RS0107505]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[RUMFLAFD1_RS0107525]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[RUMFLAFD1_RS0106670]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[RUMFLAFD1_RS0108925]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[RUMFLAFD1_RS0106680]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[RUMFLAFD1_RS0106675]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[RUMFLAFD1_RS0108935]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[RUMFLAFD1_RS0107535]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[RUMFLAFD1_RS0106685]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[RUMFLAFD1_RS0108920]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis:
+
* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
−
** '''4''' reactions found over '''3''' reactions in the full pathway
+
** '''6''' reactions found over '''15''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16210 16210]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00086 R00086]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05814 R05814]
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20855 20855]
+
{{#set: ec-number=ec-5.4.99.60}}
−
{{#set: direction=reversible}}
+
{{#set: nb gene associated=1}}
−
{{#set: common-name=h+-transporting two-sector atpase subunit e|atp synthase f0 subunit c|v-type atp synthase subunit a|v-type atp synthase subunit b|atp synthase f0 subunit b|f0f1 atp synthase subunit a|atp synthase f1 subunit epsilon|atp synthase f1 subunit gamma|v-type atp synthase subunit f|v-type atp synthase subunit d|v-type atp synthase subunit k|f0f1 atp synthase subunit alpha|f0f1 atp synthase subunit beta|v-type atp synthase subunit i}}
 
−
{{#set: ec-number=ec-3.6.3.14}}
 
−
{{#set: nb gene associated=20}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome_a}}
+
{{#set: reconstruction source=output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014}}

Latest revision as of 17:50, 15 January 2021

Reaction RXN-8768

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7377, cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
    • 6 reactions found over 15 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//rflavgem/index.php?title=RXN-8768&oldid=13192"