Difference between revisions of "TRANS-RXN-1"

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(Created page with "Category:reaction == Reaction ASPARTATE--TRNA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** aspartate--trna ligase * ec-number: ** [http://enzyme.expasy.or...")
 
(Created page with "Category:reaction == Reaction TRANS-RXN-1 == * direction: ** reversible == Reaction formula == * 1 FORMATE[c] '''<=>''' 1 FORMATE[e] == Gene(s) associated with thi...")
 
(One intermediate revision by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction ASPARTATE--TRNA-LIGASE-RXN ==
+
== Reaction TRANS-RXN-1 ==
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
−
* common-name:
 
−
** aspartate--trna ligase
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/6.1.1.12 ec-6.1.1.12]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[ASP-tRNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-ASP-tRNAs]][c] '''+''' 1 [[PPI]][c]
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* 1 [[FORMATE]][c] '''<=>''' 1 [[FORMATE]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[RUMFLAFD1_RS0107565]]
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* Gene: [[RUMFLAFD1_RS0112820]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging:
 
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** '''21''' reactions found over '''21''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: direction=reversible}}
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19650 19650]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R05577 R05577]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P56459 P56459]
 
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** [http://www.uniprot.org/uniprot/O26328 O26328]
 
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** [http://www.uniprot.org/uniprot/O83950 O83950]
 
−
** [http://www.uniprot.org/uniprot/Q58950 Q58950]
 
−
** [http://www.uniprot.org/uniprot/Q9ZLL9 Q9ZLL9]
 
−
** [http://www.uniprot.org/uniprot/O32038 O32038]
 
−
** [http://www.uniprot.org/uniprot/O67589 O67589]
 
−
** [http://www.uniprot.org/uniprot/P43817 P43817]
 
−
** [http://www.uniprot.org/uniprot/O51402 O51402]
 
−
** [http://www.uniprot.org/uniprot/Q9CE80 Q9CE80]
 
−
** [http://www.uniprot.org/uniprot/Q9ZE17 Q9ZE17]
 
−
** [http://www.uniprot.org/uniprot/Q9X1F4 Q9X1F4]
 
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** [http://www.uniprot.org/uniprot/Q9JT23 Q9JT23]
 
−
** [http://www.uniprot.org/uniprot/O58776 O58776]
 
−
** [http://www.uniprot.org/uniprot/O84546 O84546]
 
−
** [http://www.uniprot.org/uniprot/Q9Z7P2 Q9Z7P2]
 
−
** [http://www.uniprot.org/uniprot/Q9PHM7 Q9PHM7]
 
−
** [http://www.uniprot.org/uniprot/P47282 P47282]
 
−
** [http://www.uniprot.org/uniprot/Q51422 Q51422]
 
−
** [http://www.uniprot.org/uniprot/Q03577 Q03577]
 
−
** [http://www.uniprot.org/uniprot/P36429 P36429]
 
−
** [http://www.uniprot.org/uniprot/P75068 P75068]
 
−
** [http://www.uniprot.org/uniprot/P73851 P73851]
 
−
** [http://www.uniprot.org/uniprot/Q48979 Q48979]
 
−
** [http://www.uniprot.org/uniprot/Q49028 Q49028]
 
−
** [http://www.uniprot.org/uniprot/P04802 P04802]
 
−
** [http://www.uniprot.org/uniprot/P15179 P15179]
 
−
** [http://www.uniprot.org/uniprot/P21889 P21889]
 
−
** [http://www.uniprot.org/uniprot/P14868 P14868]
 
−
** [http://www.uniprot.org/uniprot/P15178 P15178]
 
−
** [http://www.uniprot.org/uniprot/O81892 O81892]
 
−
** [http://www.uniprot.org/uniprot/O74407 O74407]
 
−
** [http://www.uniprot.org/uniprot/O07683 O07683]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=aspartate--trna ligase}}
 
−
{{#set: ec-number=ec-6.1.1.12}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome_a}}
+
{{#set: reconstruction source=output_pantograph_ecoli}}

Latest revision as of 17:50, 15 January 2021

Reaction TRANS-RXN-1

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//rflavgem/index.php?title=TRANS-RXN-1&oldid=13203"