Difference between revisions of "RXN-9929"

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(Created page with "Category:reaction == Reaction TransportSeed-AMMONIA == * direction: ** left-to-right == Reaction formula == * 1.0 AMMONIA[e] '''=>''' 1.0 AMMONIA[c] == Gene(s) ass...")
 
(Created page with "Category:reaction == Reaction RXN-9929 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.3.98.1 ec-1.3.98.1] == Reaction formula == * 1 DI-...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction TransportSeed-AMMONIA ==
+
== Reaction RXN-9929 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.3.98.1 ec-1.3.98.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[AMMONIA]][e] '''=>''' 1.0 [[AMMONIA]][c]
+
* 1 [[DI-H-OROTATE]][c] '''+''' 1 [[FUM]][c] '''=>''' 1 [[OROTATE]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[RUMFLAFD1_RS0103355]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_bthetaiotaomicron_heinken2013]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0103360]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_bthetaiotaomicron_heinken2013]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7790]], UMP biosynthesis II:
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from extracellular to cytosol compartment
+
* category: [[orthology]]; source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30062 30062]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P74782 P74782]
 +
** [http://www.uniprot.org/uniprot/Q63707 Q63707]
 +
** [http://www.uniprot.org/uniprot/Q48240 Q48240]
 +
** [http://www.uniprot.org/uniprot/P32746 P32746]
 +
** [http://www.uniprot.org/uniprot/Q02127 Q02127]
 +
** [http://www.uniprot.org/uniprot/P32748 P32748]
 +
** [http://www.uniprot.org/uniprot/P28294 P28294]
 +
** [http://www.uniprot.org/uniprot/P28272 P28272]
 +
** [http://www.uniprot.org/uniprot/P46539 P46539]
 +
** [http://www.uniprot.org/uniprot/Q9CFC9 Q9CFC9]
 +
** [http://www.uniprot.org/uniprot/P25996 P25996]
 +
** [http://www.uniprot.org/uniprot/Q58070 Q58070]
 +
** [http://www.uniprot.org/uniprot/P0A7E1 P0A7E1]
 +
** [http://www.uniprot.org/uniprot/Q9JX66 Q9JX66]
 +
** [http://www.uniprot.org/uniprot/Q9PPB6 Q9PPB6]
 +
** [http://www.uniprot.org/uniprot/Q9CFW8 Q9CFW8]
 +
** [http://www.uniprot.org/uniprot/P45477 P45477]
 +
** [http://www.uniprot.org/uniprot/P32747 P32747]
 +
** [http://www.uniprot.org/uniprot/P07670 P07670]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01867 R01867]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=0}}
+
{{#set: ec-number=ec-1.3.98.1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=2}}
−
{{#set: reconstruction category=manual}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=import_from_medium}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_bthetaiotaomicron_heinken2013|output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014}}

Latest revision as of 17:50, 15 January 2021

Reaction RXN-9929

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7790, UMP biosynthesis II:
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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