Difference between revisions of "1.2.4.4-RXN"

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(Created page with "Category:reaction == Reaction RXN-14261 == * direction: ** left-to-right * common-name: ** 4-alpha-glucanotransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.25...")
 
(Created page with "Category:reaction == Reaction 1.2.4.4-RXN == * direction: ** reversible * common-name: ** 3-methyl-2-oxobutanoate dehydrogenase subunit vorb * ec-number: ** [http://enzyme...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14261 ==
+
== Reaction 1.2.4.4-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** 4-alpha-glucanotransferase
+
** 3-methyl-2-oxobutanoate dehydrogenase subunit vorb
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.25 ec-2.4.1.25]
+
** [http://enzyme.expasy.org/EC/1.2.4.4 ec-1.2.4.4]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[MALTOPENTAOSE]][c] '''+''' 1 [[MALTOSE]][c] '''=>''' 1 [[Glucopyranose]][c] '''+''' 1 [[MALTOHEXAOSE]][c]
+
* 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[BCAA-dehydrogenase-2MP-DH-lipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[RUMFLAFD1_RS0118830]]
+
* Gene: [[RUMFLAFD1_RS0102020]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_bthetaiotaomicron_heinken2013]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5046]], 2-oxoisovalerate decarboxylation to isobutanoyl-CoA:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
{{#set: direction=left-to-right}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: common-name=4-alpha-glucanotransferase}}
+
* RHEA:
−
{{#set: ec-number=ec-2.4.1.25}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13460 13460]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01701 R01701]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P21839 P21839]
 +
** [http://www.uniprot.org/uniprot/P21953 P21953]
 +
** [http://www.uniprot.org/uniprot/P37940 P37940]
 +
** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
 +
** [http://www.uniprot.org/uniprot/P37941 P37941]
 +
** [http://www.uniprot.org/uniprot/P11178 P11178]
 +
** [http://www.uniprot.org/uniprot/P12694 P12694]
 +
** [http://www.uniprot.org/uniprot/P09061 P09061]
 +
** [http://www.uniprot.org/uniprot/P09060 P09060]
 +
** [http://www.uniprot.org/uniprot/P11960 P11960]
 +
** [http://www.uniprot.org/uniprot/O84344 O84344]
 +
** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
 +
** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
 +
** [http://www.uniprot.org/uniprot/P35738 P35738]
 +
** [http://www.uniprot.org/uniprot/P50136 P50136]
 +
** [http://www.uniprot.org/uniprot/O48615 O48615]
 +
** [http://www.uniprot.org/uniprot/O03849 O03849]
 +
** [http://www.uniprot.org/uniprot/Q53592 Q53592]
 +
** [http://www.uniprot.org/uniprot/Q53593 Q53593]
 +
** [http://www.uniprot.org/uniprot/O82450 O82450]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=3-methyl-2-oxobutanoate dehydrogenase subunit vorb}}
 +
{{#set: ec-number=ec-1.2.4.4}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014|output_pantograph_bthetaiotaomicron_heinken2013|output_pantograph_bifidobacteriumadolescentisl2-32|output_pantograph_ecoli|genome_a}}
+
{{#set: reconstruction source=genome_a}}

Latest revision as of 17:50, 15 January 2021

Reaction 1.2.4.4-RXN

  • direction:
    • reversible
  • common-name:
    • 3-methyl-2-oxobutanoate dehydrogenase subunit vorb
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5046, 2-oxoisovalerate decarboxylation to isobutanoyl-CoA:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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