Difference between revisions of "RXN-12515"

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(Created page with "Category:reaction == Reaction RXN-1828 == * direction: ** reversible * common-name: ** 4-alpha-glucanotransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.25 ec-...")
 
(Created page with "Category:reaction == Reaction DTDPKIN-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.7.4.6 ec-2.7.4.6] == Reaction formula == * 1 AT...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-1828 ==
+
== Reaction DTDPKIN-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** 4-alpha-glucanotransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.25 ec-2.4.1.25]
+
** [http://enzyme.expasy.org/EC/2.7.4.6 ec-2.7.4.6]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ALPHA-GLUCOSE]][c] '''+''' 1 [[Long-linear-glucans]][c] '''<=>''' 1 [[Short-glucans]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[TDP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[TTP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[RUMFLAFD1_RS0118830]]
+
* Gene: [[RUMFLAFD1_RS0108740]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV:
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II:
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7197]], pyrimidine deoxyribonucleotide phosphorylation:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP:
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli):
 +
** '''12''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III:
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I:
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* RHEA:
−
{{#set: common-name=4-alpha-glucanotransferase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27683 27683]
−
{{#set: ec-number=ec-2.4.1.25}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02093 R02093]
 +
{{#set: direction=left-to-right}}
 +
{{#set: ec-number=ec-2.7.4.6}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=7}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome_a}}
+
{{#set: reconstruction source=output_pantograph_ecoli|genome_a}}

Revision as of 18:51, 23 November 2020

Reaction DTDPKIN-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7198, pyrimidine deoxyribonucleotides de novo biosynthesis IV:
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7187, pyrimidine deoxyribonucleotides de novo biosynthesis II:
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7197, pyrimidine deoxyribonucleotide phosphorylation:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7210, pyrimidine deoxyribonucleotides biosynthesis from CTP:
    • 8 reactions found over 8 reactions in the full pathway
  • PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli):
    • 12 reactions found over 13 reactions in the full pathway
  • PWY-6545, pyrimidine deoxyribonucleotides de novo biosynthesis III:
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7184, pyrimidine deoxyribonucleotides de novo biosynthesis I:
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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