Difference between revisions of "RUMFLAFD1 RS0115855"

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(Created page with "Category:gene == Gene RUMFLAFD1_RS0113195 == * right-end-position: ** 49384 * transcription-direction: ** negative * left-end-position: ** 48803 * centisome-position: ** 6...")
(Created page with "Category:gene == Gene RUMFLAFD1_RS0115855 == * right-end-position: ** 42673 * transcription-direction: ** positive * left-end-position: ** 40106 * centisome-position: ** 3...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene RUMFLAFD1_RS0113195 ==
+
== Gene RUMFLAFD1_RS0115855 ==
 
* right-end-position:
 
* right-end-position:
−
** 49384
+
** 42673
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* left-end-position:
 
* left-end-position:
−
** 48803
+
** 40106
 
* centisome-position:
 
* centisome-position:
−
** 69.34904    
+
** 32.30733    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[Ruminococcus_23112020]]
 
* [[Ruminococcus_23112020]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[HISTIDPHOS-RXN]]
+
* [[PEPSYNTH-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a
 
−
* [[IMIDPHOSDEHYD-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[HISTSYN-PWY]]
+
* [[GLUCONEO-PWY]]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''12''' reactions found over '''13''' reactions in the full pathway
−
{{#set: right-end-position=49384}}
+
* [[GLYCOLYSIS]]
−
{{#set: transcription-direction=negative}}
+
** '''12''' reactions found over '''12''' reactions in the full pathway
−
{{#set: left-end-position=48803}}
+
* [[PWY-5484]]
−
{{#set: centisome-position=69.34904   }}
+
** '''11''' reactions found over '''11''' reactions in the full pathway
 +
* [[P23-PWY]]
 +
** '''6''' reactions found over '''12''' reactions in the full pathway
 +
{{#set: right-end-position=42673}}
 +
{{#set: transcription-direction=positive}}
 +
{{#set: left-end-position=40106}}
 +
{{#set: centisome-position=32.30733   }}
 
{{#set: organism associated=Ruminococcus_23112020}}
 
{{#set: organism associated=Ruminococcus_23112020}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 17:42, 15 January 2021

Gene RUMFLAFD1_RS0115855

  • right-end-position:
    • 42673
  • transcription-direction:
    • positive
  • left-end-position:
    • 40106
  • centisome-position:
    • 32.30733

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • GLYCOLYSIS
    • 12 reactions found over 12 reactions in the full pathway
  • PWY-5484
    • 11 reactions found over 11 reactions in the full pathway
  • P23-PWY
    • 6 reactions found over 12 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//rflavgem/index.php?title=RUMFLAFD1_RS0115855&oldid=10188"