Difference between revisions of "RUMFLAFD1 RS0114020"
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(Created page with "Category:gene == Gene RUMFLAFD1_RS0101370 == * right-end-position: ** 19236 * transcription-direction: ** negative * left-end-position: ** 17770 * centisome-position: ** 3...") |
(Created page with "Category:gene == Gene RUMFLAFD1_RS0114020 == * right-end-position: ** 10977 * transcription-direction: ** positive * left-end-position: ** 10363 * common-name: ** thie * c...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene RUMFLAFD1_RS0114020 == |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 10977 |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 10363 |
| + | * common-name: | ||
| + | ** thie | ||
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 26.407257 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[Ruminococcus_23112020]] | * [[Ruminococcus_23112020]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[RXN-12610]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-12611]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[THI-P-SYN-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-6907]] |
| − | ** '''6''' reactions found over '''3''' reactions in the full pathway | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-6893]] |
| − | ** ''' | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
| − | {{#set: right-end-position= | + | * [[PWY-6894]] |
| − | {{#set: transcription-direction= | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[PWY-7356]] |
| − | {{#set: centisome-position= | + | ** '''5''' reactions found over '''7''' reactions in the full pathway |
| + | * [[PWY-7357]] | ||
| + | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-6897]] | ||
| + | ** '''4''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-6908]] | ||
| + | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
| + | {{#set: right-end-position=10977}} | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: left-end-position=10363}} | ||
| + | {{#set: common-name=thie}} | ||
| + | {{#set: centisome-position=26.407257 }} | ||
{{#set: organism associated=Ruminococcus_23112020}} | {{#set: organism associated=Ruminococcus_23112020}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=7}} |
Latest revision as of 17:42, 15 January 2021
Contents
Gene RUMFLAFD1_RS0114020
- right-end-position:
- 10977
- transcription-direction:
- positive
- left-end-position:
- 10363
- common-name:
- thie
- centisome-position:
- 26.407257
Organism(s) associated with this gene
Reaction(s) associated
- RXN-12610
- Category: annotation
- source: genome_a; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12611
- Category: annotation
- source: genome_a; tool: pathwaytools; comment: n.a
- Category: annotation
- THI-P-SYN-RXN
- Category: annotation
- source: genome_a; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014; tool: pantograph; comment: n.a
- source: output_pantograph_bifidobacteriumadolescentisl2-32; tool: pantograph; comment: n.a
- source: output_pantograph_ecoli; tool: pantograph; comment: n.a
- source: output_pantograph_bthetaiotaomicron_heinken2013; tool: pantograph; comment: n.a
- source: output_pantograph_l_plantarum_wcfs1; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6907
- 2 reactions found over 3 reactions in the full pathway
- PWY-6893
- 2 reactions found over 2 reactions in the full pathway
- PWY-6894
- 2 reactions found over 2 reactions in the full pathway
- PWY-7356
- 5 reactions found over 7 reactions in the full pathway
- PWY-7357
- 4 reactions found over 6 reactions in the full pathway
- PWY-6897
- 4 reactions found over 3 reactions in the full pathway
- PWY-6908
- 2 reactions found over 3 reactions in the full pathway
