Difference between revisions of "ExchangeSeed-CL-"

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(Created page with "Category:reaction == Reaction SPERMIDINESYN-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.16 ec-2.5.1.16] == Reaction formula == * 1...")
(Created page with "Category:reaction == Reaction ExchangeSeed-CL- == * direction: ** reversible == Reaction formula == * 1.0 CL-[C-BOUNDARY] '''<=>''' 1.0 CL-[e] == Gene(s) associate...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction SPERMIDINESYN-RXN ==
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== Reaction ExchangeSeed-CL- ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.5.1.16 ec-2.5.1.16]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[PUTRESCINE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''<=>''' 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SPERMIDINE]][c]
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* 1.0 [[CL-]][C-BOUNDARY] '''<=>''' 1.0 [[CL-]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[RUMFLAFD1_RS0121135]]
 
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** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[BSUBPOLYAMSYN-PWY]], spermidine biosynthesis I:
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
−
* category: [[orthology]]; source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12724 12724]
 
−
* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01920 R01920]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P19623 P19623]
 
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** [http://www.uniprot.org/uniprot/Q57761 Q57761]
 
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** [http://www.uniprot.org/uniprot/Q12074 Q12074]
 
−
** [http://www.uniprot.org/uniprot/Q12455 Q12455]
 
−
** [http://www.uniprot.org/uniprot/P09158 P09158]
 
−
** [http://www.uniprot.org/uniprot/O48660 O48660]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
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{{#set: ec-number=ec-2.5.1.16}}
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{{#set: nb gene associated=0}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=import_from_medium}}
−
{{#set: reconstruction source=output_pantograph_ecoli|output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014}}
 

Latest revision as of 17:47, 15 January 2021

Reaction ExchangeSeed-CL-

  • direction:
    • reversible

Reaction formula

  • 1.0 CL-[C-BOUNDARY] <=> 1.0 CL-[e]

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//rflavgem/index.php?title=ExchangeSeed-CL-&oldid=12192"