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| | [[Category:reaction]] | | [[Category:reaction]] |
| − | == Reaction ACETALD-DEHYDROG-RXN == | + | == Reaction ExchangeSeed-ISOBUTYRATE == |
| | * direction: | | * direction: |
| | ** reversible | | ** reversible |
| − | * ec-number:
| |
| − | ** [http://enzyme.expasy.org/EC/1.2.1.10 ec-1.2.1.10]
| |
| | == Reaction formula == | | == Reaction formula == |
| − | * 1 [[ACETALD]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] | + | * 1.0 [[ISOBUTYRATE]][C-BOUNDARY] '''<=>''' 1.0 [[ISOBUTYRATE]][e] |
| | == Gene(s) associated with this reaction == | | == Gene(s) associated with this reaction == |
| − | * Gene: [[RUMFLAFD1_RS0115470]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | *** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | *** Source: [[output_pantograph_l_plantarum_wcfs1]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[RUMFLAFD1_RS0118935]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_l_plantarum_wcfs1]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| | == Pathway(s) == | | == Pathway(s) == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| |
| − | * [[P161-PWY]], acetylene degradation (anaerobic):
| |
| − | ** '''4''' reactions found over '''5''' reactions in the full pathway
| |
| − | * [[PWY-5436]], L-threonine degradation IV:
| |
| − | ** '''2''' reactions found over '''2''' reactions in the full pathway
| |
| − | * [[PWY-5480]], pyruvate fermentation to ethanol I:
| |
| − | ** '''3''' reactions found over '''3''' reactions in the full pathway
| |
| − | * [[PWY-5162]], 2-hydroxypenta-2,4-dienoate degradation:
| |
| − | ** '''1''' reactions found over '''3''' reactions in the full pathway
| |
| − | * [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii):
| |
| − | ** '''8''' reactions found over '''7''' reactions in the full pathway
| |
| − | * [[FERMENTATION-PWY]], mixed acid fermentation:
| |
| − | ** '''11''' reactions found over '''16''' reactions in the full pathway
| |
| − | * [[PWY-6587]], pyruvate fermentation to ethanol III:
| |
| − | ** '''3''' reactions found over '''3''' reactions in the full pathway
| |
| − | * [[ETOH-ACETYLCOA-ANA-PWY]], ethanol degradation I:
| |
| − | ** '''2''' reactions found over '''2''' reactions in the full pathway
| |
| − | * [[PHOSPHONOTASE-PWY]], 2-aminoethylphosphonate degradation I:
| |
| − | ** '''1''' reactions found over '''3''' reactions in the full pathway
| |
| − | * [[P122-PWY]], heterolactic fermentation:
| |
| − | ** '''11''' reactions found over '''18''' reactions in the full pathway
| |
| − | * [[PWY-7085]], triethylamine degradation:
| |
| − | ** '''1''' reactions found over '''6''' reactions in the full pathway
| |
| − | * [[PWY-7180]], 2'-deoxy-α-D-ribose 1-phosphate degradation:
| |
| − | ** '''1''' reactions found over '''3''' reactions in the full pathway
| |
| − | </div>
| |
| | == Reconstruction information == | | == Reconstruction information == |
| − | * category: [[orthology]]; source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a | + | * category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment |
| − | * category: [[orthology]]; source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a
| |
| | == External links == | | == External links == |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23291 23291]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00228 R00228]
| |
| − | * UNIPROT:
| |
| − | ** [http://www.uniprot.org/uniprot/Q52434 Q52434]
| |
| − | ** [http://www.uniprot.org/uniprot/P0A9Q7 P0A9Q7]
| |
| − | ** [http://www.uniprot.org/uniprot/P77580 P77580]
| |
| − | ** [http://www.uniprot.org/uniprot/P71866 P71866]
| |
| − | ** [http://www.uniprot.org/uniprot/Q52060 Q52060]
| |
| − | ** [http://www.uniprot.org/uniprot/Q52016 Q52016]
| |
| − | ** [http://www.uniprot.org/uniprot/O85978 O85978]
| |
| | {{#set: direction=reversible}} | | {{#set: direction=reversible}} |
| − | {{#set: ec-number=ec-1.2.1.10}}
| + | {{#set: nb gene associated=0}} |
| − | {{#set: nb gene associated=2}} | + | {{#set: nb pathway associated=0}} |
| − | {{#set: nb pathway associated=12}} | + | {{#set: reconstruction category=manual}} |
| − | {{#set: reconstruction category=orthology}} | + | {{#set: reconstruction tool=curation}} |
| − | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}} |
| − | {{#set: reconstruction comment=n.a}} | + | {{#set: reconstruction source=import_from_medium}} |
| − | {{#set: reconstruction source=output_pantograph_bifidobacteriumadolescentisl2-32|output_pantograph_l_plantarum_wcfs1|output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014}} | |
