Difference between revisions of "RUMFLAFD1 RS0113190"
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(Created page with "Category:gene == Gene RUMFLAFD1_RS0101085 == * right-end-position: ** 46947 * transcription-direction: ** negative * left-end-position: ** 46090 * centisome-position: ** 9...") |
(Created page with "Category:gene == Gene RUMFLAFD1_RS0113190 == * right-end-position: ** 48803 * transcription-direction: ** negative * left-end-position: ** 48198 * common-name: ** hish * c...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene RUMFLAFD1_RS0113190 == |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 48803 |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 48198 |
| + | * common-name: | ||
| + | ** hish | ||
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 68.489334 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[Ruminococcus_23112020]] | * [[Ruminococcus_23112020]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[GLUTAMIDOTRANS-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[GLUTAMIN-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-17900]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[ | + | * [[HISTSYN-PWY]] |
| − | ** ''' | + | ** '''10''' reactions found over '''10''' reactions in the full pathway |
| − | {{#set: right-end-position= | + | * [[GLUTAMINDEG-PWY]] |
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| + | * [[CITRULBIO-PWY]] | ||
| + | ** '''7''' reactions found over '''8''' reactions in the full pathway | ||
| + | {{#set: right-end-position=48803}} | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: left-end-position= | + | {{#set: left-end-position=48198}} |
| − | {{#set: centisome-position= | + | {{#set: common-name=hish}} |
| + | {{#set: centisome-position=68.489334 }} | ||
{{#set: organism associated=Ruminococcus_23112020}} | {{#set: organism associated=Ruminococcus_23112020}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Latest revision as of 17:40, 15 January 2021
Contents
Gene RUMFLAFD1_RS0113190
- right-end-position:
- 48803
- transcription-direction:
- negative
- left-end-position:
- 48198
- common-name:
- hish
- centisome-position:
- 68.489334
Organism(s) associated with this gene
Reaction(s) associated
- GLUTAMIDOTRANS-RXN
- Category: annotation
- source: genome_a; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014; tool: pantograph; comment: n.a
- source: output_pantograph_bifidobacteriumadolescentisl2-32; tool: pantograph; comment: n.a
- source: output_pantograph_ecoli; tool: pantograph; comment: n.a
- source: output_pantograph_bthetaiotaomicron_heinken2013; tool: pantograph; comment: n.a
- source: output_pantograph_l_plantarum_wcfs1; tool: pantograph; comment: n.a
- Category: annotation
- GLUTAMIN-RXN
- Category: annotation
- source: genome_a; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-17900
- Category: annotation
- source: genome_a; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- HISTSYN-PWY
- 10 reactions found over 10 reactions in the full pathway
- GLUTAMINDEG-PWY
- 1 reactions found over 1 reactions in the full pathway
- CITRULBIO-PWY
- 7 reactions found over 8 reactions in the full pathway
