Difference between revisions of "RUMFLAFD1 RS0110360"
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(Created page with "Category:gene == Gene RUMFLAFD1_RS0110985 == * right-end-position: ** 40391 * transcription-direction: ** positive * left-end-position: ** 39738 * common-name: ** rpe * ce...") |
(Created page with "Category:gene == Gene RUMFLAFD1_RS0110360 == * right-end-position: ** 88198 * transcription-direction: ** negative * left-end-position: ** 86900 * centisome-position: ** 8...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene RUMFLAFD1_RS0110360 == |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 88198 |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** negative |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 86900 |
− | |||
− | |||
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 85.04183 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[Ruminococcus_23112020]] | * [[Ruminococcus_23112020]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[2PGADEHYDRAT-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | ||
Line 24: | Line 22: | ||
*** source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * [[P341-PWY]] | ||
+ | ** '''6''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[GLUCONEO-PWY]] | ||
+ | ** '''12''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[PWY-1042]] | ||
+ | ** '''8''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-5484]] | ||
+ | ** '''11''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[P124-PWY]] | ||
+ | ** '''11''' reactions found over '''15''' reactions in the full pathway | ||
+ | * [[PWY-7124]] | ||
+ | ** '''7''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY66-399]] | ||
+ | ** '''11''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-2221]] | ||
+ | ** '''3''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-6901]] | ||
+ | ** '''8''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-7218]] | ||
+ | ** '''6''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5723]] | ||
+ | ** '''7''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[ANAGLYCOLYSIS-PWY]] | ||
+ | ** '''10''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-7003]] | ||
+ | ** '''8''' reactions found over '''6''' reactions in the full pathway | ||
* [[P122-PWY]] | * [[P122-PWY]] | ||
** '''11''' reactions found over '''18''' reactions in the full pathway | ** '''11''' reactions found over '''18''' reactions in the full pathway | ||
− | * [[ | + | * [[NPGLUCAT-PWY]] |
− | + | ** '''4''' reactions found over '''9''' reactions in the full pathway | |
− | + | * [[PWY-6142]] | |
− | |||
− | |||
− | |||
− | |||
− | ** '''4''' reactions found over ''' | ||
− | * [[ | ||
− | |||
− | |||
** '''9''' reactions found over '''13''' reactions in the full pathway | ** '''9''' reactions found over '''13''' reactions in the full pathway | ||
− | * [[ | + | * [[PWY-1622]] |
− | ** ''' | + | ** '''5''' reactions found over '''13''' reactions in the full pathway |
− | {{#set: right-end-position= | + | * [[PWY-6886]] |
− | {{#set: transcription-direction= | + | ** '''7''' reactions found over '''5''' reactions in the full pathway |
− | {{#set: left-end-position= | + | * [[GLYCOLYSIS]] |
− | + | ** '''12''' reactions found over '''12''' reactions in the full pathway | |
− | {{#set: centisome-position= | + | </div> |
+ | {{#set: right-end-position=88198}} | ||
+ | {{#set: transcription-direction=negative}} | ||
+ | {{#set: left-end-position=86900}} | ||
+ | {{#set: centisome-position=85.04183 }} | ||
{{#set: organism associated=Ruminococcus_23112020}} | {{#set: organism associated=Ruminococcus_23112020}} | ||
{{#set: nb reaction associated=1}} | {{#set: nb reaction associated=1}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=19}} |
Latest revision as of 17:40, 15 January 2021
Contents
Gene RUMFLAFD1_RS0110360
- right-end-position:
- 88198
- transcription-direction:
- negative
- left-end-position:
- 86900
- centisome-position:
- 85.04183
Organism(s) associated with this gene
Reaction(s) associated
- 2PGADEHYDRAT-RXN
- Category: annotation
- source: genome_a; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014; tool: pantograph; comment: n.a
- source: output_pantograph_bifidobacteriumadolescentisl2-32; tool: pantograph; comment: n.a
- source: output_pantograph_ecoli; tool: pantograph; comment: n.a
- source: output_pantograph_bthetaiotaomicron_heinken2013; tool: pantograph; comment: n.a
- source: output_pantograph_l_plantarum_wcfs1; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- P341-PWY
- 6 reactions found over 10 reactions in the full pathway
- GLUCONEO-PWY
- 12 reactions found over 13 reactions in the full pathway
- PWY-1042
- 8 reactions found over 10 reactions in the full pathway
- PWY-5484
- 11 reactions found over 11 reactions in the full pathway
- P124-PWY
- 11 reactions found over 15 reactions in the full pathway
- PWY-7124
- 7 reactions found over 8 reactions in the full pathway
- PWY66-399
- 11 reactions found over 12 reactions in the full pathway
- PWY-2221
- 3 reactions found over 9 reactions in the full pathway
- PWY-6901
- 8 reactions found over 8 reactions in the full pathway
- PWY-7218
- 6 reactions found over 4 reactions in the full pathway
- PWY-5723
- 7 reactions found over 10 reactions in the full pathway
- ANAGLYCOLYSIS-PWY
- 10 reactions found over 11 reactions in the full pathway
- PWY-7003
- 8 reactions found over 6 reactions in the full pathway
- P122-PWY
- 11 reactions found over 18 reactions in the full pathway
- NPGLUCAT-PWY
- 4 reactions found over 9 reactions in the full pathway
- PWY-6142
- 9 reactions found over 13 reactions in the full pathway
- PWY-1622
- 5 reactions found over 13 reactions in the full pathway
- PWY-6886
- 7 reactions found over 5 reactions in the full pathway
- GLYCOLYSIS
- 12 reactions found over 12 reactions in the full pathway