Difference between revisions of "RUMFLAFD1 RS0116695"
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(Created page with "Category:gene == Gene RUMFLAFD1_RS0106725 == * right-end-position: ** 14323 * transcription-direction: ** positive * left-end-position: ** 12704 * common-name: ** lyss * c...") |
(Created page with "Category:gene == Gene RUMFLAFD1_RS0116695 == * right-end-position: ** 102825 * transcription-direction: ** positive * left-end-position: ** 100525 * centisome-position: **...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene RUMFLAFD1_RS0116695 == |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 102825 |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 100525 |
| − | |||
| − | |||
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 78.678986 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[Ruminococcus_23112020]] | * [[Ruminococcus_23112020]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
| + | * [[GDPPYPHOSKIN-RXN]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[GTPPYPHOSKIN-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN0- | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[PPGPPSYN-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN0-6427]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a | ||
| + | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[ | + | * [[PPGPPMET-PWY]] |
| − | ** ''' | + | ** '''6''' reactions found over '''6''' reactions in the full pathway |
| − | {{#set: right-end-position= | + | {{#set: right-end-position=102825}} |
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
| − | {{#set: left-end-position= | + | {{#set: left-end-position=100525}} |
| − | + | {{#set: centisome-position=78.678986 }} | |
| − | {{#set: centisome-position= | ||
{{#set: organism associated=Ruminococcus_23112020}} | {{#set: organism associated=Ruminococcus_23112020}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
Latest revision as of 17:41, 15 January 2021
Contents
Gene RUMFLAFD1_RS0116695
- right-end-position:
- 102825
- transcription-direction:
- positive
- left-end-position:
- 100525
- centisome-position:
- 78.678986
Organism(s) associated with this gene
Reaction(s) associated
- GDPPYPHOSKIN-RXN
- Category: orthology
- source: output_pantograph_ecoli; tool: pantograph; comment: n.a
- Category: orthology
- GTPPYPHOSKIN-RXN
- Category: annotation
- source: genome_a; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014; tool: pantograph; comment: n.a
- source: output_pantograph_bifidobacteriumadolescentisl2-32; tool: pantograph; comment: n.a
- source: output_pantograph_bthetaiotaomicron_heinken2013; tool: pantograph; comment: n.a
- source: output_pantograph_l_plantarum_wcfs1; tool: pantograph; comment: n.a
- Category: annotation
- PPGPPSYN-RXN
- Category: annotation
- source: genome_a; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ecoli; tool: pantograph; comment: n.a
- source: output_pantograph_bthetaiotaomicron_heinken2013; tool: pantograph; comment: n.a
- Category: annotation
- RXN0-6427
- Category: orthology
- source: output_pantograph_ecoli; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PPGPPMET-PWY
- 6 reactions found over 6 reactions in the full pathway
