Difference between revisions of "RXN-12686"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17918 RXN-17918] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12686 RXN-12686] == * common name: ** pheophytinase b * ec number: ** [http://enzyme.expasy.org...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17918 RXN-17918] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12686 RXN-12686] ==
 +
* common name:
 +
** pheophytinase b
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.1.14 EC-3.1.1.14]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
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== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[DNA-Ligase-L-lysine-adenylate]][c] '''+''' 1 [[5-Phospho-terminated-DNAs]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[A-5-prime-PP-5-prime-DNA]][c] '''+''' 1 [[DNA-Ligase-L-lysine]][c]
+
** 1 [[CPD-8178]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-7062]][c] '''+''' 1 [[PHYTOL]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a [DNA ligase]-N6-(5'-adenylyl)-L-lysine[c] '''+''' 1 a 5'-phospho-[DNA][c] '''+''' 2 H+[c] '''=>''' 1 an adenosine-5'-diphospho-5'-[DNA][c] '''+''' 1 a [DNA ligase]-L-lysine[c]
+
** 1 pheophytin b[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 pheophorbide b[c] '''+''' 1 phytol[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN19959_c0_g1_i3]]
+
* Gene: [[DN22077_c0_g1_i3]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN4556_c0_g1_i1]]
+
* Gene: [[DN22077_c0_g1_i2]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN22077_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
{{#set: common name=pheophytinase b}}
 +
{{#set: ec number=EC-3.1.1.14}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN19959_c0_g1_i3|DN4556_c0_g1_i1}}
+
{{#set: gene associated=DN22077_c0_g1_i3|DN22077_c0_g1_i2|DN22077_c0_g1_i1}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:22, 15 January 2021

Reaction RXN-12686

  • common name:
    • pheophytinase b
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 pheophytin b[c] + 1 H2O[c] => 1 H+[c] + 1 pheophorbide b[c] + 1 phytol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//ucomgem/index.php?title=RXN-12686&oldid=8989"