Difference between revisions of "RXN-19142"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.32-RXN 2.5.1.32-RXN] == * common name: ** prephytoene diphosphate synthase * direction: ** LE...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-19142 RXN-19142] == * common name: ** β-zeacarotene desaturase * ec number: ** [http://enz...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.32-RXN 2.5.1.32-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-19142 RXN-19142] ==
 
* common name:
 
* common name:
−
** prephytoene diphosphate synthase
+
** β-zeacarotene desaturase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.3.5.6 EC-1.3.5.6]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* Synonym(s):
 
* Synonym(s):
−
** PSase
 
−
** geranylgeranyl-diphosphate geranylgeranyltransferase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[GERANYLGERANYL-PP]][c] '''=>''' 1 [[CPD-464]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[CPD-7419]][c] '''+''' 1 [[ETR-Quinones]][c] '''=>''' 1 [[CPD1F-126]][c] '''+''' 1 [[ETR-Quinols]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 geranylgeranyl diphosphate[c] '''=>''' 1 prephytoene diphosphate[c] '''+''' 1 diphosphate[c]
+
** 1 β-zeacarotene[c] '''+''' 1 an electron-transfer quinone[c] '''=>''' 1 γ-carotene[c] '''+''' 1 an electron-transfer quinol[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN21121_c0_g1_i4]]
+
* Gene: [[DN20619_c0_g1_i1]]
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN21121_c0_g1_i2]]
 
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7943]], lycopadiene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7943 PWY-7943]
 
−
** '''1''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-6287]], neurosporene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6287 PWY-6287]
 
−
** '''2''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-6475]], trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
 
−
** '''4''' reactions found over '''NA''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: common name=β-zeacarotene desaturase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22297 22297]
+
{{#set: ec number=EC-1.3.5.6}}
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02065 R02065]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P53609 P53609]
 
−
** [http://www.uniprot.org/uniprot/P37295 P37295]
 
−
** [http://www.uniprot.org/uniprot/P22872 P22872]
 
−
** [http://www.uniprot.org/uniprot/P53610 P53610]
 
−
** [http://www.uniprot.org/uniprot/P53612 P53612]
 
−
** [http://www.uniprot.org/uniprot/P17056 P17056]
 
−
** [http://www.uniprot.org/uniprot/P49293 P49293]
 
−
{{#set: common name=prephytoene diphosphate synthase}}
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=PSase|geranylgeranyl-diphosphate geranylgeranyltransferase}}
+
{{#set: gene associated=DN20619_c0_g1_i1}}
−
{{#set: gene associated=DN21121_c0_g1_i4|DN21121_c0_g1_i2}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=PWY-7943|PWY-6287|PWY-6475}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:23, 15 January 2021

Reaction RXN-19142

  • common name:
    • β-zeacarotene desaturase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 β-zeacarotene[c] + 1 an electron-transfer quinone[c] => 1 γ-carotene[c] + 1 an electron-transfer quinol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//ucomgem/index.php?title=RXN-19142&oldid=9100"