Difference between revisions of "RXN-16616"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.2-RXN 1.14.11.2-RXN] == * common name: ** prolyl 4-hydroxylase * ec number: ** [http://enzy...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16616 RXN-16616] == * common name: ** (5Z)-3-oxo-tetradec-5-enoyl-[acyl-carrier-protein] reduct...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.2-RXN 1.14.11.2-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16616 RXN-16616] ==
 
* common name:
 
* common name:
−
** prolyl 4-hydroxylase
+
** (5Z)-3-oxo-tetradec-5-enoyl-[acyl-carrier-protein] reductase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.14.11.2 EC-1.14.11.2]
+
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
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== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROCOLLAGEN-L-PROLINE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-6321]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[5Z-3-oxo-tetradec-5-enoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3R-5Z-3-hydroxy-tetradec-5-enoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a [procollagen]-L-proline[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''=>''' 1 a [procollagen] trans 4-hyroxy-L-proline[c] '''+''' 1 succinate[c] '''+''' 1 CO2[c]
+
** 1 a (5Z)-3-oxo-tetradec-5-enoyl-[acp][c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 a (3R,5Z)-3-hydroxy-tetradec-5-enoyl-[acp][c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN21786_c0_g1_i2]]
+
* Gene: [[DN20375_c0_g1_i4]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN19566_c0_g1_i3]]
+
* Gene: [[DN20375_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN11040_c0_g1_i1]]
+
* Gene: [[DN20375_c0_g1_i2]]
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN21786_c0_g1_i1]]
 
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN19566_c0_g1_i1]]
 
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN16449_c0_g1_i1]]
 
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7894]], procollagen hydroxylation and glycosylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7894 PWY-7894]
+
* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
−
** '''1''' reactions found over '''NA''' reactions in the full pathway
+
** '''10''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: common name=(5Z)-3-oxo-tetradec-5-enoyl-[acyl-carrier-protein] reductase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18946 18946]
+
{{#set: ec number=EC-1.1.1.100}}
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03219 R03219]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P21195 P21195]
 
−
** [http://www.uniprot.org/uniprot/Q10576 Q10576]
 
−
** [http://www.uniprot.org/uniprot/P16924 P16924]
 
−
** [http://www.uniprot.org/uniprot/P13674 P13674]
 
−
** [http://www.uniprot.org/uniprot/P05307 P05307]
 
−
** [http://www.uniprot.org/uniprot/P09102 P09102]
 
−
** [http://www.uniprot.org/uniprot/P07237 P07237]
 
−
** [http://www.uniprot.org/uniprot/Q922C8 Q922C8]
 
−
** [http://www.uniprot.org/uniprot/P04785 P04785]
 
−
** [http://www.uniprot.org/uniprot/P54001 P54001]
 
−
{{#set: common name=prolyl 4-hydroxylase}}
 
−
{{#set: ec number=EC-1.14.11.2}}
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN21786_c0_g1_i2|DN19566_c0_g1_i3|DN11040_c0_g1_i1|DN21786_c0_g1_i1|DN19566_c0_g1_i1|DN16449_c0_g1_i1}}
+
{{#set: gene associated=DN20375_c0_g1_i4|DN20375_c0_g1_i1|DN20375_c0_g1_i2}}
−
{{#set: in pathway=PWY-7894}}
+
{{#set: in pathway=PWY-7664}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:20, 15 January 2021

Reaction RXN-16616

  • common name:
    • (5Z)-3-oxo-tetradec-5-enoyl-[acyl-carrier-protein] reductase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7664, oleate biosynthesis IV (anaerobic): PWY-7664
    • 10 reactions found over NA reactions in the full pathway

Reconstruction information

External links

Property "Common name" (as page type) with input value "(5Z)-3-oxo-tetradec-5-enoyl-[acyl-carrier-protein] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




Retrieved from "http://gem-aureme.genouest.org//ucomgem/index.php?title=RXN-16616&oldid=8024"