Difference between revisions of "AMP-DEPHOSPHORYLATION-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1439 RXN1G-1439] == * common name: ** 6-O-trans-keto-mycolyl-trehalose-6-phosphate phosphohyd...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEPHOSPHORYLATION-RXN AMP-DEPHOSPHORYLATION-RXN] == * common name: ** AMP phosphatase * ec numb...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1439 RXN1G-1439] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEPHOSPHORYLATION-RXN AMP-DEPHOSPHORYLATION-RXN] ==
 
* common name:
 
* common name:
−
** 6-O-trans-keto-mycolyl-trehalose-6-phosphate phosphohydrolase
+
** AMP phosphatase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.3.12 EC-3.1.3.12]
+
** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
Line 11: Line 11:
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD1G-774]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD1G-1354]][c] '''+''' 1 [[Pi]][c]
+
** 1 [[AMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADENOSINE]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 6-O-trans-keto-mycolyl-trehalose 6-phosphate[c] '''+''' 1 H2O[c] '''=>''' 1 trehalose-trans-keto-mono-mycolate[c] '''+''' 1 phosphate[c]
+
** 1 AMP[c] '''+''' 1 H2O[c] '''=>''' 1 adenosine[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN17327_c0_g1_i1]]
+
* Gene: [[DN31244_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN16240_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN11312_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
+
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
−
** '''17''' reactions found over '''NA''' reactions in the full pathway
+
** '''4''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 28: Line 34:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=6-O-trans-keto-mycolyl-trehalose-6-phosphate phosphohydrolase}}
+
* RHEA:
−
{{#set: ec number=EC-3.1.3.12}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29376 29376]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00183 R00183]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P06196 P06196]
 +
** [http://www.uniprot.org/uniprot/P21588 P21588]
 +
** [http://www.uniprot.org/uniprot/O34313 O34313]
 +
** [http://www.uniprot.org/uniprot/Q9KM44 Q9KM44]
 +
** [http://www.uniprot.org/uniprot/O29385 O29385]
 +
** [http://www.uniprot.org/uniprot/P44569 P44569]
 +
** [http://www.uniprot.org/uniprot/O83142 O83142]
 +
** [http://www.uniprot.org/uniprot/P49902 P49902]
 +
** [http://www.uniprot.org/uniprot/P22848 P22848]
 +
** [http://www.uniprot.org/uniprot/Q05927 Q05927]
 +
** [http://www.uniprot.org/uniprot/P21589 P21589]
 +
** [http://www.uniprot.org/uniprot/P29240 P29240]
 +
** [http://www.uniprot.org/uniprot/P07024 P07024]
 +
{{#set: common name=AMP phosphatase}}
 +
{{#set: ec number=EC-3.1.3.5}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN17327_c0_g1_i1}}
+
{{#set: gene associated=DN31244_c0_g1_i1|DN16240_c0_g1_i1|DN11312_c0_g1_i1}}
−
{{#set: in pathway=PWYG-321}}
+
{{#set: in pathway=SALVADEHYPOX-PWY}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:20, 15 January 2021

Reaction AMP-DEPHOSPHORYLATION-RXN

  • common name:
    • AMP phosphatase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 AMP[c] + 1 H2O[c] => 1 adenosine[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//ucomgem/index.php?title=AMP-DEPHOSPHORYLATION-RXN&oldid=8083"