Difference between revisions of "RXN-9539"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN] == * common name:...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9539 RXN-9539] == * common name: ** 3-oxo-palmitoyl-[acyl-carrier protein] synthase ** β-k...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9539 RXN-9539] ==
 
* common name:
 
* common name:
−
** 4-hydroxyphenylpyruvate dioxygenase
+
** 3-oxo-palmitoyl-[acyl-carrier protein] synthase
 +
** β-ketopalmityl-[acp] synthase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.13.11.27 EC-1.13.11.27]
+
** [http://enzyme.expasy.org/EC/2.3.1.179 EC-2.3.1.179]
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
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== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[P-HYDROXY-PHENYLPYRUVATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[HOMOGENTISATE]][c]
+
** 1 [[Myristoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-palmitoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 4-hydroxyphenylpyruvate[c] '''+''' 1 oxygen[c] '''=>''' 1 CO2[c] '''+''' 1 homogentisate[c]
+
** 1 a myristoyl-[acp][c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 a 3-oxo-palmitoyl-[acp][c] '''+''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN20870_c0_g1_i5]]
+
* Gene: [[DN18128_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[TYRFUMCAT-PWY]], L-tyrosine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=TYRFUMCAT-PWY TYRFUMCAT-PWY]
+
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
−
** '''1''' reactions found over '''NA''' reactions in the full pathway
+
** '''27''' reactions found over '''NA''' reactions in the full pathway
−
* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422]
 
−
** '''1''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-7432]], L-phenylalanine biosynthesis III (cytosolic, plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7432 PWY-7432]
 
−
** '''2''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-1581]], plastoquinol-9 biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1581 PWY-1581]
 
−
** '''1''' reactions found over '''NA''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: common name=3-oxo-palmitoyl-[acyl-carrier protein] synthase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16190 16190]
+
{{#set: common name=β-ketopalmityl-[acp] synthase}}
−
* LIGAND-RXN:
+
{{#set: ec number=EC-2.3.1.179}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02521 R02521]
+
{{#set: ec number=EC-2.3.1.41}}
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P32754 P32754]
 
−
** [http://www.uniprot.org/uniprot/Q02110 Q02110]
 
−
** [http://www.uniprot.org/uniprot/P32755 P32755]
 
−
** [http://www.uniprot.org/uniprot/O48604 O48604]
 
−
** [http://www.uniprot.org/uniprot/O23920 O23920]
 
−
** [http://www.uniprot.org/uniprot/P93836 P93836]
 
−
{{#set: common name=4-hydroxyphenylpyruvate dioxygenase}}
 
−
{{#set: ec number=EC-1.13.11.27}}
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN20870_c0_g1_i5}}
+
{{#set: gene associated=DN18128_c0_g1_i1}}
−
{{#set: in pathway=TYRFUMCAT-PWY|PWY-1422|PWY-7432|PWY-1581}}
+
{{#set: in pathway=PWY-5971}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:20, 15 January 2021

Reaction RXN-9539

  • common name:
    • 3-oxo-palmitoyl-[acyl-carrier protein] synthase
    • β-ketopalmityl-[acp] synthase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 27 reactions found over NA reactions in the full pathway

Reconstruction information

External links

Property "Common name" (as page type) with input value "3-oxo-palmitoyl-[acyl-carrier protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Common name" (as page type) with input value "β-ketopalmityl-[acp] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





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