Difference between revisions of "RXN0-3501"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10705 RXN-10705] == * common name: ** OPC4-trans-2-enoyl-CoA hydratase * ec number: ** [http://...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-3501 RXN0-3501] == * common name: ** menaquinol:nitrate oxidoreductase * ec number: ** [http:/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10705 RXN-10705] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-3501 RXN0-3501] ==
 
* common name:
 
* common name:
−
** OPC4-trans-2-enoyl-CoA hydratase
+
** menaquinol:nitrate oxidoreductase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
+
** [http://enzyme.expasy.org/EC/1.7.5.1 EC-1.7.5.1]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
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== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-11526]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-11527]][c]
+
** 1 [[NITRATE]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[Menaquinols]][c] '''=>''' 1 [[NITRITE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Menaquinones]][c] '''+''' 2 [[PROTON]][e]
 
* With common name(s):
 
* With common name(s):
−
** 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA[c]
+
** 1 nitrate[c] '''+''' 2 H+[c] '''+''' 1 a menaquinol[c] '''=>''' 1 nitrite[c] '''+''' 1 H2O[c] '''+''' 1 a menaquinone[c] '''+''' 2 H+[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN20688_c0_g1_i3]]
+
* Gene: [[DN19698_c0_g2_i1]]
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN20688_c0_g1_i2]]
 
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN20688_c0_g1_i5]]
 
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
+
* [[PWY0-1581]], nitrate reduction IX (dissimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1581 PWY0-1581]
−
** '''12''' reactions found over '''NA''' reactions in the full pathway
+
** '''2''' reactions found over '''NA''' reactions in the full pathway
 +
* [[PWY0-1321]], nitrate reduction III (dissimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1321 PWY0-1321]
 +
** '''1''' reactions found over '''NA''' reactions in the full pathway
 +
* [[PWY0-1352]], nitrate reduction VIII (dissimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1352 PWY0-1352]
 +
** '''1''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=OPC4-trans-2-enoyl-CoA hydratase}}
+
* RHEA:
−
{{#set: ec number=EC-4.2.1.17}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29136 29136]
 +
{{#set: common name=menaquinol:nitrate oxidoreductase}}
 +
{{#set: ec number=EC-1.7.5.1}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN20688_c0_g1_i3|DN20688_c0_g1_i2|DN20688_c0_g1_i5}}
+
{{#set: gene associated=DN19698_c0_g2_i1}}
−
{{#set: in pathway=PWY-735}}
+
{{#set: in pathway=PWY0-1581|PWY0-1321|PWY0-1352}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:20, 15 January 2021

Reaction RXN0-3501

  • common name:
    • menaquinol:nitrate oxidoreductase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1581, nitrate reduction IX (dissimilatory): PWY0-1581
    • 2 reactions found over NA reactions in the full pathway
  • PWY0-1321, nitrate reduction III (dissimilatory): PWY0-1321
    • 1 reactions found over NA reactions in the full pathway
  • PWY0-1352, nitrate reduction VIII (dissimilatory): PWY0-1352
    • 1 reactions found over NA reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//ucomgem/index.php?title=RXN0-3501&oldid=8158"