Difference between revisions of "RXN-10707"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13406 RXN-13406] == * ec number: ** [http://enzyme.expasy.org/EC/2.1.1.162 EC-2.1.1.162] * dire...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10707 RXN-10707] == * common name: ** fatty-acyl coenzyme A oxidase * ec number: ** [http://enz...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13406 RXN-13406] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10707 RXN-10707] ==
 +
* common name:
 +
** fatty-acyl coenzyme A oxidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.1.162 EC-2.1.1.162]
+
** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
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== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 3 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[GLY]][c] '''=>''' 3 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[BETAINE]][c] '''+''' 3 [[PROTON]][c]
+
** 1 [[CPD-11525]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-11526]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 3 S-adenosyl-L-methionine[c] '''+''' 1 glycine[c] '''=>''' 3 S-adenosyl-L-homocysteine[c] '''+''' 1 glycine betaine[c] '''+''' 3 H+[c]
+
** 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA[c] '''+''' 1 oxygen[c] '''=>''' 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA[c] '''+''' 1 hydrogen peroxide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN13539_c0_g1_i1]]
+
* Gene: [[DN17066_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN19232_c0_g1_i2]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN13602_c0_g1_i2]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
 +
** '''12''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: common name=fatty-acyl coenzyme A oxidase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32478 32478]
+
{{#set: ec number=EC-1.3.3.6}}
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R10062 R10062]
 
−
{{#set: ec number=EC-2.1.1.162}}
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN13539_c0_g1_i1}}
+
{{#set: gene associated=DN17066_c0_g1_i1|DN19232_c0_g1_i2|DN13602_c0_g1_i2}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY-735}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:21, 15 January 2021

Reaction RXN-10707

  • common name:
    • fatty-acyl coenzyme A oxidase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA[c] + 1 oxygen[c] => 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA[c] + 1 hydrogen peroxide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-735, jasmonic acid biosynthesis: PWY-735
    • 12 reactions found over NA reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//ucomgem/index.php?title=RXN-10707&oldid=8453"