Difference between revisions of "DLACTDEHYDROGNAD-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-385 RXN0-385] == * ec number: ** [http://enzyme.expasy.org/EC/3.6.1.9 EC-3.6.1.9] * direction:...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DLACTDEHYDROGNAD-RXN DLACTDEHYDROGNAD-RXN] == * common name: ** D-lactate dehydrogenase * ec number...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-385 RXN0-385] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DLACTDEHYDROGNAD-RXN DLACTDEHYDROGNAD-RXN] ==
 +
* common name:
 +
** D-lactate dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.6.1.9 EC-3.6.1.9]
+
** [http://enzyme.expasy.org/EC/1.1.1.28 EC-1.1.1.28]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
Line 9: Line 11:
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[DGTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[DGMP]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[PYRUVATE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[D-LACTATE]][c] '''+''' 1 [[NAD]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 dGTP[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 dGMP[c] '''+''' 1 diphosphate[c]
+
** 1 pyruvate[c] '''+''' 1 NADH[c] '''+''' 1 H+[c] '''=>''' 1 (R)-lactate[c] '''+''' 1 NAD+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN12413_c0_g1_i1]]
+
* Gene: [[DN20113_c0_g1_i2]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN22472_c0_g1_i2]]
+
* Gene: [[DN28424_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN1679_c0_g1_i1]]
+
* Gene: [[DN19060_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN22472_c0_g1_i3]]
+
* Gene: [[DN11448_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN20113_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6901]], superpathway of glucose and xylose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6901 PWY-6901]
 +
** '''9''' reactions found over '''NA''' reactions in the full pathway
 +
* [[FERMENTATION-PWY]], mixed acid fermentation: [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY]
 +
** '''8''' reactions found over '''NA''' reactions in the full pathway
 +
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
 +
** '''10''' reactions found over '''NA''' reactions in the full pathway
 +
* [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii): [http://metacyc.org/META/NEW-IMAGE?object=PWY4LZ-257 PWY4LZ-257]
 +
** '''1''' reactions found over '''NA''' reactions in the full pathway
 +
* [[PWY-6454]], vancomycin resistance I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6454 PWY-6454]
 +
** '''1''' reactions found over '''NA''' reactions in the full pathway
 +
* [[ALACAT2-PWY]], L-alanine degradation II (to D-lactate): [http://metacyc.org/META/NEW-IMAGE?object=ALACAT2-PWY ALACAT2-PWY]
 +
** '''2''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28362 28362]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16371 16371]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01855 R01855]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00704 R00704]
−
{{#set: ec number=EC-3.6.1.9}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P26297 P26297]
 +
** [http://www.uniprot.org/uniprot/P26298 P26298]
 +
** [http://www.uniprot.org/uniprot/Q7M4J0 Q7M4J0]
 +
** [http://www.uniprot.org/uniprot/Q9R553 Q9R553]
 +
** [http://www.uniprot.org/uniprot/P06149 P06149]
 +
** [http://www.uniprot.org/uniprot/Q9JT76 Q9JT76]
 +
** [http://www.uniprot.org/uniprot/Q9JUP8 Q9JUP8]
 +
** [http://www.uniprot.org/uniprot/P52643 P52643]
 +
** [http://www.uniprot.org/uniprot/P45295 P45295]
 +
** [http://www.uniprot.org/uniprot/P30901 P30901]
 +
** [http://www.uniprot.org/uniprot/Q89388 Q89388]
 +
{{#set: common name=D-lactate dehydrogenase}}
 +
{{#set: ec number=EC-1.1.1.28}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN12413_c0_g1_i1|DN22472_c0_g1_i2|DN1679_c0_g1_i1|DN22472_c0_g1_i3}}
+
{{#set: gene associated=DN20113_c0_g1_i2|DN28424_c0_g1_i1|DN19060_c0_g1_i1|DN11448_c0_g1_i1|DN20113_c0_g1_i1}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY-6901|FERMENTATION-PWY|P122-PWY|PWY4LZ-257|PWY-6454|ALACAT2-PWY}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:21, 15 January 2021

Reaction DLACTDEHYDROGNAD-RXN

  • common name:
    • D-lactate dehydrogenase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 pyruvate[c] + 1 NADH[c] + 1 H+[c] => 1 (R)-lactate[c] + 1 NAD+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6901, superpathway of glucose and xylose degradation: PWY-6901
    • 9 reactions found over NA reactions in the full pathway
  • FERMENTATION-PWY, mixed acid fermentation: FERMENTATION-PWY
    • 8 reactions found over NA reactions in the full pathway
  • P122-PWY, heterolactic fermentation: P122-PWY
    • 10 reactions found over NA reactions in the full pathway
  • PWY4LZ-257, superpathway of fermentation (Chlamydomonas reinhardtii): PWY4LZ-257
    • 1 reactions found over NA reactions in the full pathway
  • PWY-6454, vancomycin resistance I: PWY-6454
    • 1 reactions found over NA reactions in the full pathway
  • ALACAT2-PWY, L-alanine degradation II (to D-lactate): ALACAT2-PWY
    • 2 reactions found over NA reactions in the full pathway

Reconstruction information

External links





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