Difference between revisions of "RXN-10702"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11357 RXN-11357] == * common name: ** 9,9′-dicis-ζ-carotene desaturase ** 7,9,9'-cis...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10702 RXN-10702] == * common name: ** OPC6-3-hydroxyacyl-CoA dehydrogenase * ec number: ** [htt...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11357 RXN-11357] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10702 RXN-10702] ==
 
* common name:
 
* common name:
−
** 9,9′-dicis-ζ-carotene desaturase
+
** OPC6-3-hydroxyacyl-CoA dehydrogenase
−
** 7,9,9'-cis-neurosporene desaturase
+
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* Synonym(s):
 
* Synonym(s):
−
** ζ-carotene desaturase
 
−
** ZDS
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-7524]][c] '''+''' 1 [[ETR-Quinones]][c] '''=>''' 1 [[CPD-7496]][c] '''+''' 1 [[ETR-Quinols]][c]
+
** 1 [[CPD-11523]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD-11524]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 7,9,9'-cis-neurosporene[c] '''+''' 1 an electron-transfer quinone[c] '''=>''' 1 prolycopene[c] '''+''' 1 an electron-transfer quinol[c]
+
** 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA[c] '''+''' 1 NADH[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN20619_c0_g1_i1]]
+
* Gene: [[DN14559_c0_g1_i3]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN5555_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6475]], trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
+
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
−
** '''4''' reactions found over '''NA''' reactions in the full pathway
+
** '''12''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: common name=OPC6-3-hydroxyacyl-CoA dehydrogenase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30964 30964]
+
{{#set: ec number=EC-1.1.1.35}}
−
{{#set: common name=9,9′-dicis-ζ-carotene desaturase}}
 
−
{{#set: common name=7,9,9'-cis-neurosporene desaturase}}
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ζ-carotene desaturase|ZDS}}
+
{{#set: gene associated=DN14559_c0_g1_i3|DN5555_c0_g1_i1}}
−
{{#set: gene associated=DN20619_c0_g1_i1}}
+
{{#set: in pathway=PWY-735}}
−
{{#set: in pathway=PWY-6475}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:21, 15 January 2021

Reaction RXN-10702

  • common name:
    • OPC6-3-hydroxyacyl-CoA dehydrogenase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA[c] + 1 NAD+[c] => 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA[c] + 1 NADH[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-735, jasmonic acid biosynthesis: PWY-735
    • 12 reactions found over NA reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//ucomgem/index.php?title=RXN-10702&oldid=8515"