Difference between revisions of "RXN-18777"
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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-488 RXN1G-488] == * common name: ** trans-docos-2-enoyl-[acyl-carrier protein] reductase (NAD...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18777 RXN-18777] == * common name: ** 1,4-alpha-glucan branching enzyme * ec number: ** [http:/...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18777 RXN-18777] == |
* common name: | * common name: | ||
| − | ** | + | ** 1,4-alpha-glucan branching enzyme |
| − | |||
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.4.1.18 EC-2.4.1.18] |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| Line 12: | Line 11: | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[1-4-alpha-D-Glucan]][c] '''=>''' 1 [[GlgE-Glycogen]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 a | + | ** 1 a 1,4-α-D-glucan[c] '''=>''' 1 a GlgE-glycogen[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[DN17187_c0_g1_i1]] |
| + | ** Source: [[annotation-transcriptome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[DN16185_c0_g1_i1]] | ||
| + | ** Source: [[annotation-transcriptome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[DN19586_c0_g2_i1]] | ||
| + | ** Source: [[annotation-transcriptome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[DN19586_c0_g2_i2]] | ||
| + | ** Source: [[annotation-transcriptome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[DN19586_c0_g2_i4]] | ||
** Source: [[annotation-transcriptome]] | ** Source: [[annotation-transcriptome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| − | * [[ | + | * [[PWY-7900]], glycogen biosynthesis III (from α-maltose 1-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7900 PWY-7900] |
| − | ** ''' | + | ** '''3''' reactions found over '''NA''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 29: | Line 40: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: common name= | + | {{#set: common name=1,4-alpha-glucan branching enzyme}} |
| − | + | {{#set: ec number=EC-2.4.1.18}} | |
| − | {{#set: ec number=EC- | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: gene associated= | + | {{#set: gene associated=DN17187_c0_g1_i1|DN16185_c0_g1_i1|DN19586_c0_g2_i1|DN19586_c0_g2_i2|DN19586_c0_g2_i4}} |
| − | {{#set: in pathway= | + | {{#set: in pathway=PWY-7900}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-transcriptome}} | {{#set: reconstruction source=annotation-transcriptome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 14:21, 15 January 2021
Contents
Reaction RXN-18777
- common name:
- 1,4-alpha-glucan branching enzyme
- ec number:
- direction:
- LEFT-TO-RIGHT
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 1-4-alpha-D-Glucan[c] => 1 GlgE-Glycogen[c]
- With common name(s):
- 1 a 1,4-α-D-glucan[c] => 1 a GlgE-glycogen[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: DN17187_c0_g1_i1
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
- Gene: DN16185_c0_g1_i1
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
- Gene: DN19586_c0_g2_i1
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
- Gene: DN19586_c0_g2_i2
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
- Gene: DN19586_c0_g2_i4
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
Pathways
- PWY-7900, glycogen biosynthesis III (from α-maltose 1-phosphate): PWY-7900
- 3 reactions found over NA reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-transcriptome
- Tool: pathwaytools
- Source: annotation-transcriptome
