Difference between revisions of "PECTINESTERASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.8.4.9-RXN 1.8.4.9-RXN] == * common name: ** adenylyl-sulfate reductase (glutathione) * ec number:...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PECTINESTERASE-RXN PECTINESTERASE-RXN] == * common name: ** pectin methylesterase * ec number: ** [...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.8.4.9-RXN 1.8.4.9-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PECTINESTERASE-RXN PECTINESTERASE-RXN] ==
 
* common name:
 
* common name:
−
** adenylyl-sulfate reductase (glutathione)
+
** pectin methylesterase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.8.4.9 EC-1.8.4.9]
+
** [http://enzyme.expasy.org/EC/3.1.1.11 EC-3.1.1.11]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
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== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[APS]][c] '''+''' 2 [[GLUTATHIONE]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[SO3]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[OXIDIZED-GLUTATHIONE]][c]
+
** 1 [[Pectin]][c] '''+''' n [[WATER]][c] '''=>''' 1 [[PECTATE]][c] '''+''' n [[METOH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 adenosine 5'-phosphosulfate[c] '''+''' 2 glutathione[c] '''=>''' 2 H+[c] '''+''' 1 sulfite[c] '''+''' 1 AMP[c] '''+''' 1 glutathione disulfide[c]
+
** 1 a pectin[c] '''+''' n H2O[c] '''=>''' 1 a pectate[c] '''+''' n methanol[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN14354_c0_g1_i2]]
+
* Gene: [[DN3811_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[SULFMETII-PWY]], sulfate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=SULFMETII-PWY SULFMETII-PWY]
+
* [[PWY-7246]], pectin degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7246 PWY-7246]
−
** '''3''' reactions found over '''NA''' reactions in the full pathway
+
** '''1''' reactions found over '''NA''' reactions in the full pathway
 +
* [[PWY-7248]], pectin degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7248 PWY-7248]
 +
** '''1''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14143 14143]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05717 R05717]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02362 R02362]
−
{{#set: common name=adenylyl-sulfate reductase (glutathione)}}
+
* UNIPROT:
−
{{#set: ec number=EC-1.8.4.9}}
+
** [http://www.uniprot.org/uniprot/P14280 P14280]
 +
** [http://www.uniprot.org/uniprot/Q43867 Q43867]
 +
** [http://www.uniprot.org/uniprot/P0C1A9 P0C1A9]
 +
** [http://www.uniprot.org/uniprot/P17872 P17872]
 +
** [http://www.uniprot.org/uniprot/Q42534 Q42534]
 +
** [http://www.uniprot.org/uniprot/P0C1A8 P0C1A8]
 +
** [http://www.uniprot.org/uniprot/Q43112 Q43112]
 +
** [http://www.uniprot.org/uniprot/Q43113 Q43113]
 +
** [http://www.uniprot.org/uniprot/Q43114 Q43114]
 +
** [http://www.uniprot.org/uniprot/P09607 P09607]
 +
** [http://www.uniprot.org/uniprot/Q47474 Q47474]
 +
** [http://www.uniprot.org/uniprot/Q43234 Q43234]
 +
** [http://www.uniprot.org/uniprot/Q43043 Q43043]
 +
** [http://www.uniprot.org/uniprot/O22256 O22256]
 +
** [http://www.uniprot.org/uniprot/O48712 O48712]
 +
** [http://www.uniprot.org/uniprot/O81300 O81300]
 +
** [http://www.uniprot.org/uniprot/O81516 O81516]
 +
** [http://www.uniprot.org/uniprot/O65197 O65197]
 +
** [http://www.uniprot.org/uniprot/O24298 O24298]
 +
** [http://www.uniprot.org/uniprot/O24299 O24299]
 +
** [http://www.uniprot.org/uniprot/Q43837 Q43837]
 +
** [http://www.uniprot.org/uniprot/Q43838 Q43838]
 +
** [http://www.uniprot.org/uniprot/Q96576 Q96576]
 +
** [http://www.uniprot.org/uniprot/Q43143 Q43143]
 +
** [http://www.uniprot.org/uniprot/Q96548 Q96548]
 +
** [http://www.uniprot.org/uniprot/O04886 O04886]
 +
** [http://www.uniprot.org/uniprot/O04887 O04887]
 +
** [http://www.uniprot.org/uniprot/Q42934 Q42934]
 +
** [http://www.uniprot.org/uniprot/Q42935 Q42935]
 +
** [http://www.uniprot.org/uniprot/Q42936 Q42936]
 +
** [http://www.uniprot.org/uniprot/Q42937 Q42937]
 +
** [http://www.uniprot.org/uniprot/Q42608 Q42608]
 +
** [http://www.uniprot.org/uniprot/Q5MFV8 Q5MFV8]
 +
** [http://www.uniprot.org/uniprot/O80722 O80722]
 +
** [http://www.uniprot.org/uniprot/Q9MBB6 Q9MBB6]
 +
{{#set: common name=pectin methylesterase}}
 +
{{#set: ec number=EC-3.1.1.11}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN14354_c0_g1_i2}}
+
{{#set: gene associated=DN3811_c0_g1_i1}}
−
{{#set: in pathway=SULFMETII-PWY}}
+
{{#set: in pathway=PWY-7246|PWY-7248}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:21, 15 January 2021

Reaction PECTINESTERASE-RXN

  • common name:
    • pectin methylesterase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a pectin[c] + n H2O[c] => 1 a pectate[c] + n methanol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7246, pectin degradation II: PWY-7246
    • 1 reactions found over NA reactions in the full pathway
  • PWY-7248, pectin degradation III: PWY-7248
    • 1 reactions found over NA reactions in the full pathway

Reconstruction information

External links





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