Difference between revisions of "RXN-15122"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATPPHOSPHORIBOSYLTRANS-RXN ATPPHOSPHORIBOSYLTRANS-RXN] == * common name: ** ATP phosphoribosyltrans...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15122 RXN-15122] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With ide...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATPPHOSPHORIBOSYLTRANS-RXN ATPPHOSPHORIBOSYLTRANS-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15122 RXN-15122] ==
−
* common name:
 
−
** ATP phosphoribosyltransferase
 
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/2.4.2.17 EC-2.4.2.17]
 
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
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== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PHOSPHORIBOSYL-ATP]][c] '''+''' 1 [[PPI]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PRPP]][c]
+
** 1 [[THR]][c] '''<=>''' 1 [[CPD-15056]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 1-(5-phospho-&beta;-D-ribosyl)-ATP[c] '''+''' 1 diphosphate[c] '''<=>''' 1 H+[c] '''+''' 1 ATP[c] '''+''' 1 5-phospho-&alpha;-D-ribose 1-diphosphate[c]
+
** 1 L-threonine[c] '''<=>''' 1 (2Z)-2-aminobut-2-enoate[c] '''+''' 1 H2O[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN9916_c0_g1_i1]]
+
* Gene: [[DN20648_c0_g1_i2]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN9916_c0_g1_i3]]
+
* Gene: [[DN20648_c0_g1_i4]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN10627_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
+
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
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** '''6''' reactions found over '''NA''' reactions in the full pathway
+
** '''5''' reactions found over '''NA''' reactions in the full pathway
 +
* [[PWY-5437]], L-threonine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5437 PWY-5437]
 +
** '''1''' reactions found over '''NA''' reactions in the full pathway
 +
* [[PWY-5826]], hypoglycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5826 PWY-5826]
 +
** '''1''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18476 18476]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01071 R01071]
 
−
* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q9X0D2 Q9X0D2]
 
−
** [http://www.uniprot.org/uniprot/Q58601 Q58601]
 
−
** [http://www.uniprot.org/uniprot/O34520 O34520]
 
−
** [http://www.uniprot.org/uniprot/Q9RUE2 Q9RUE2]
 
−
** [http://www.uniprot.org/uniprot/P64347 P64347]
 
−
** [http://www.uniprot.org/uniprot/Q9PM78 Q9PM78]
 
−
** [http://www.uniprot.org/uniprot/Q02129 Q02129]
 
−
** [http://www.uniprot.org/uniprot/P43853 P43853]
 
−
** [http://www.uniprot.org/uniprot/O67543 O67543]
 
−
** [http://www.uniprot.org/uniprot/P40373 P40373]
 
−
** [http://www.uniprot.org/uniprot/P46586 P46586]
 
−
** [http://www.uniprot.org/uniprot/Q55503 Q55503]
 
−
** [http://www.uniprot.org/uniprot/Q9S762 Q9S762]
 
−
** [http://www.uniprot.org/uniprot/P00498 P00498]
 
−
** [http://www.uniprot.org/uniprot/P00499 P00499]
 
−
** [http://www.uniprot.org/uniprot/P60757 P60757]
 
−
{{#set: common name=ATP phosphoribosyltransferase}}
 
−
{{#set: ec number=EC-2.4.2.17}}
 
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: gene associated=DN9916_c0_g1_i1|DN9916_c0_g1_i3}}
+
{{#set: gene associated=DN20648_c0_g1_i2|DN20648_c0_g1_i4|DN10627_c0_g1_i1}}
−
{{#set: in pathway=HISTSYN-PWY}}
+
{{#set: in pathway=ILEUSYN-PWY|PWY-5437|PWY-5826}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:21, 15 January 2021

Reaction RXN-15122

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-threonine[c] <=> 1 (2Z)-2-aminobut-2-enoate[c] + 1 H2O[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • ILEUSYN-PWY, L-isoleucine biosynthesis I (from threonine): ILEUSYN-PWY
    • 5 reactions found over NA reactions in the full pathway
  • PWY-5437, L-threonine degradation I: PWY-5437
    • 1 reactions found over NA reactions in the full pathway
  • PWY-5826, hypoglycin biosynthesis: PWY-5826
    • 1 reactions found over NA reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//ucomgem/index.php?title=RXN-15122&oldid=8534"