Difference between revisions of "RXN-10701"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9526 RXN-9526] == * common name: ** trans oct-2-enoyl-[acyl-carrier protein] reductase (NADPH,...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10701 RXN-10701] == * common name: ** 3-oxoacyl CoA thiolase * ec number: ** [http://enzyme.exp...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9526 RXN-9526] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10701 RXN-10701] ==
 
* common name:
 
* common name:
−
** trans oct-2-enoyl-[acyl-carrier protein] reductase (NADPH, B-specific)
+
** 3-oxoacyl CoA thiolase
−
** octanoyl-[acp] reductase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.1.10 EC-1.3.1.10]
+
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
−
** [http://enzyme.expasy.org/EC/1.3.1.39 EC-1.3.1.39]
 
−
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* Synonym(s):
 
* Synonym(s):
−
** trans oct-2-enoyl-ACP reductase
 
−
** trans oct-2-enoyl acyl-carrier-protein reductase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-Octenoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Octanoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[CPD-11528]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CPD-11529]][c] '''+''' 1 [[ACETYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a trans oct-2-enoyl-[acp][c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 an octanoyl-[acp][c] '''+''' 1 NADP+[c]
+
** 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 (+)-7-epi-jasmonoyl-CoA[c] '''+''' 1 acetyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN20375_c0_g1_i4]]
+
* Gene: [[DN11478_c0_g1_i2]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN11444_c0_g1_i1]]
+
* Gene: [[DN11886_c0_g1_i2]]
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN6632_c0_g1_i1]]
 
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN25390_c0_g1_i1]]
 
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN20375_c0_g1_i1]]
 
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN13183_c0_g1_i1]]
 
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN20375_c0_g1_i2]]
 
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN18128_c0_g1_i1]]
 
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
+
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
−
** '''27''' reactions found over '''NA''' reactions in the full pathway
+
** '''12''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 55: Line 31:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=trans oct-2-enoyl-[acyl-carrier protein] reductase (NADPH, B-specific)}}
+
{{#set: common name=3-oxoacyl CoA thiolase}}
−
{{#set: common name=octanoyl-[acp] reductase}}
+
{{#set: ec number=EC-2.3.1.16}}
−
{{#set: ec number=EC-1.3.1.10}}
 
−
{{#set: ec number=EC-1.3.1.39}}
 
−
{{#set: ec number=EC-2.3.1.85}}
 
−
{{#set: ec number=EC-2.3.1.86}}
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=trans oct-2-enoyl-ACP reductase|trans oct-2-enoyl acyl-carrier-protein reductase}}
+
{{#set: gene associated=DN11478_c0_g1_i2|DN11886_c0_g1_i2}}
−
{{#set: gene associated=DN20375_c0_g1_i4|DN11444_c0_g1_i1|DN6632_c0_g1_i1|DN25390_c0_g1_i1|DN20375_c0_g1_i1|DN13183_c0_g1_i1|DN20375_c0_g1_i2|DN18128_c0_g1_i1}}
+
{{#set: in pathway=PWY-735}}
−
{{#set: in pathway=PWY-5994}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:21, 15 January 2021

Reaction RXN-10701

  • common name:
    • 3-oxoacyl CoA thiolase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA[c] + 1 coenzyme A[c] => 1 (+)-7-epi-jasmonoyl-CoA[c] + 1 acetyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-735, jasmonic acid biosynthesis: PWY-735
    • 12 reactions found over NA reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//ucomgem/index.php?title=RXN-10701&oldid=8624"