Difference between revisions of "RXN-13323"
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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10771 RXN-10771] == * common name: ** (6-4)DNA photolyase * ec number: ** [http://enzyme.expasy...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13323 RXN-13323] == * common name: ** phytoene synthase * ec number: ** [http://enzyme.expasy.o...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13323 RXN-13323] == |
* common name: | * common name: | ||
| − | ** | + | ** phytoene synthase |
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.5.1.32 EC-2.5.1.32] |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| Line 11: | Line 11: | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** | + | ** 2 [[GERANYLGERANYL-PP]][c] '''=>''' 1 [[CPD-12321]][c] '''+''' 2 [[PPI]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** | + | ** 2 geranylgeranyl diphosphate[c] '''=>''' 1 15-cis-phytoene[c] '''+''' 2 diphosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[DN21121_c0_g1_i4]] |
| + | ** Source: [[annotation-transcriptome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[DN21121_c0_g1_i2]] | ||
** Source: [[annotation-transcriptome]] | ** Source: [[annotation-transcriptome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| Line 26: | Line 29: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: common name= | + | * RHEA: |
| − | {{#set: ec number=EC- | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34478 34478] |
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R10177 R10177] | ||
| + | {{#set: common name=phytoene synthase}} | ||
| + | {{#set: ec number=EC-2.5.1.32}} | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: gene associated= | + | {{#set: gene associated=DN21121_c0_g1_i4|DN21121_c0_g1_i2}} |
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-transcriptome}} | {{#set: reconstruction source=annotation-transcriptome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 14:22, 15 January 2021
Contents
Reaction RXN-13323
- common name:
- phytoene synthase
- ec number:
- direction:
- LEFT-TO-RIGHT
- Synonym(s):
Reaction Formula
- With identifiers:
- 2 GERANYLGERANYL-PP[c] => 1 CPD-12321[c] + 2 PPI[c]
- With common name(s):
- 2 geranylgeranyl diphosphate[c] => 1 15-cis-phytoene[c] + 2 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: DN21121_c0_g1_i4
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
- Gene: DN21121_c0_g1_i2
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-transcriptome
- Tool: pathwaytools
- Source: annotation-transcriptome
External links
