Difference between revisions of "F16BDEPHOS-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4319 RXNQT-4319] == * common name: ** (E)-1-(L-cystein-S-yl)-N-hydroxy-ω-(methylsulfany...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=F16BDEPHOS-RXN F16BDEPHOS-RXN] == * common name: ** fructose-1,6-bisphosphatase * ec number: ** [ht...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4319 RXNQT-4319] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=F16BDEPHOS-RXN F16BDEPHOS-RXN] ==
 
* common name:
 
* common name:
** (E)-1-(L-cystein-S-yl)-N-hydroxy-ω-(methylsulfanyl)pentan-1-imine C-S lyase
+
** fructose-1,6-bisphosphatase
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/4.4.1 EC-4.4.1]
+
** [http://enzyme.expasy.org/EC/3.1.3.11 EC-3.1.3.11]
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[CPDQT-406]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[CPDQT-411]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[AMMONIUM]][c]
+
** 1 [[FRUCTOSE-16-DIPHOSPHATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FRUCTOSE-6P]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
** 1 S-5-methylthiopentylhydroximoyl-L-cysteine[c] '''+''' 1 H2O[c] '''<=>''' 1 (E)-N-hydroxy-5-(methylsulfanyl)pentimidothioate[c] '''+''' 1 pyruvate[c] '''+''' 1 ammonium[c]
+
** 1 &beta;-D-fructose 1,6-bisphosphate[c] '''+''' 1 H2O[c] '''=>''' 1 &beta;-D-fructofuranose 6-phosphate[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* Gene: [[DN12139_c0_g1_i1]]
+
* Gene: [[DN21516_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN21385_c0_g1_i3]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN21516_c0_g1_i2]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN13916_c0_g1_i2]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN13916_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
 +
** '''12''' reactions found over '''NA''' reactions in the full pathway
 +
* [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484]
 +
** '''10''' reactions found over '''NA''' reactions in the full pathway
 +
* [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399]
 +
** '''11''' reactions found over '''NA''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
 +
** '''11''' reactions found over '''NA''' reactions in the full pathway
 +
* [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle): [http://metacyc.org/META/NEW-IMAGE?object=P185-PWY P185-PWY]
 +
** '''9''' reactions found over '''NA''' reactions in the full pathway
 +
* [[SUCSYN-PWY]], sucrose biosynthesis I (from photosynthesis): [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY]
 +
** '''6''' reactions found over '''NA''' reactions in the full pathway
 +
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS]
 +
** '''11''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: common name=(E)-1-(L-cystein-S-yl)-N-hydroxy-&omega;-(methylsulfanyl)pentan-1-imine C-S lyase}}
+
* RHEA:
{{#set: ec number=EC-4.4.1}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11065 11065]
{{#set: direction=REVERSIBLE}}
+
* LIGAND-RXN:
{{#set: gene associated=DN12139_c0_g1_i1}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00762 R00762]
{{#set: in pathway=}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P09199 P09199]
 +
** [http://www.uniprot.org/uniprot/P19112 P19112]
 +
** [http://www.uniprot.org/uniprot/P22780 P22780]
 +
** [http://www.uniprot.org/uniprot/P09467 P09467]
 +
** [http://www.uniprot.org/uniprot/Q9JUL6 Q9JUL6]
 +
** [http://www.uniprot.org/uniprot/Q9CIU9 Q9CIU9]
 +
** [http://www.uniprot.org/uniprot/P09202 P09202]
 +
** [http://www.uniprot.org/uniprot/Q45597 Q45597]
 +
** [http://www.uniprot.org/uniprot/P45292 P45292]
 +
** [http://www.uniprot.org/uniprot/Q9PP83 Q9PP83]
 +
** [http://www.uniprot.org/uniprot/P19912 P19912]
 +
** [http://www.uniprot.org/uniprot/P19911 P19911]
 +
** [http://www.uniprot.org/uniprot/Q9HGZ4 Q9HGZ4]
 +
** [http://www.uniprot.org/uniprot/P09201 P09201]
 +
** [http://www.uniprot.org/uniprot/P0A993 P0A993]
 +
** [http://www.uniprot.org/uniprot/P00636 P00636]
 +
** [http://www.uniprot.org/uniprot/P23014 P23014]
 +
** [http://www.uniprot.org/uniprot/P27994 P27994]
 +
** [http://www.uniprot.org/uniprot/P14766 P14766]
 +
** [http://www.uniprot.org/uniprot/P09195 P09195]
 +
** [http://www.uniprot.org/uniprot/Q7M0S7 Q7M0S7]
 +
** [http://www.uniprot.org/uniprot/P25851 P25851]
 +
** [http://www.uniprot.org/uniprot/Q05079 Q05079]
 +
** [http://www.uniprot.org/uniprot/P46275 P46275]
 +
** [http://www.uniprot.org/uniprot/P46276 P46276]
 +
** [http://www.uniprot.org/uniprot/Q43139 Q43139]
 +
** [http://www.uniprot.org/uniprot/P00637 P00637]
 +
** [http://www.uniprot.org/uniprot/O65827 O65827]
 +
** [http://www.uniprot.org/uniprot/Q42796 Q42796]
 +
** [http://www.uniprot.org/uniprot/P46267 P46267]
 +
** [http://www.uniprot.org/uniprot/Q07204 Q07204]
 +
** [http://www.uniprot.org/uniprot/P22418 P22418]
 +
{{#set: common name=fructose-1,6-bisphosphatase}}
 +
{{#set: ec number=EC-3.1.3.11}}
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: gene associated=DN21516_c0_g1_i1|DN21385_c0_g1_i3|DN21516_c0_g1_i2|DN13916_c0_g1_i2|DN13916_c0_g1_i1}}
 +
{{#set: in pathway=CALVIN-PWY|PWY-5484|PWY66-399|GLUCONEO-PWY|P185-PWY|SUCSYN-PWY|GLYCOLYSIS}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:22, 15 January 2021

Reaction F16BDEPHOS-RXN

  • common name:
    • fructose-1,6-bisphosphatase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 β-D-fructose 1,6-bisphosphate[c] + 1 H2O[c] => 1 β-D-fructofuranose 6-phosphate[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • CALVIN-PWY, Calvin-Benson-Bassham cycle: CALVIN-PWY
    • 12 reactions found over NA reactions in the full pathway
  • PWY-5484, glycolysis II (from fructose 6-phosphate): PWY-5484
    • 10 reactions found over NA reactions in the full pathway
  • PWY66-399, gluconeogenesis III: PWY66-399
    • 11 reactions found over NA reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
    • 11 reactions found over NA reactions in the full pathway
  • P185-PWY, formaldehyde assimilation III (dihydroxyacetone cycle): P185-PWY
    • 9 reactions found over NA reactions in the full pathway
  • SUCSYN-PWY, sucrose biosynthesis I (from photosynthesis): SUCSYN-PWY
    • 6 reactions found over NA reactions in the full pathway
  • GLYCOLYSIS, glycolysis I (from glucose 6-phosphate): GLYCOLYSIS
    • 11 reactions found over NA reactions in the full pathway

Reconstruction information

External links