Difference between revisions of "GSAAMINOTRANS-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] == * common name: ** cysteate aminotransferase * ec number: ** [http://enzyme....")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GSAAMINOTRANS-RXN GSAAMINOTRANS-RXN] == * common name: ** glutamate-1-semialdehyde aminotransferase...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GSAAMINOTRANS-RXN GSAAMINOTRANS-RXN] ==
 
* common name:
 
* common name:
−
** cysteate aminotransferase
+
** glutamate-1-semialdehyde aminotransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.6.1.1 EC-2.6.1.1]
+
** [http://enzyme.expasy.org/EC/5.4.3.8 EC-5.4.3.8]
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[L-CYSTEATE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[CPD-380]][c] '''+''' 1 [[GLT]][c]
+
** 1 [[GLUTAMATE-1-SEMIALDEHYDE]][c] '''=>''' 1 [[5-AMINO-LEVULINATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-cysteate[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 3-sulfopyruvate[c] '''+''' 1 L-glutamate[c]
+
** 1 (S)-4-amino-5-oxopentanoate[c] '''=>''' 1 5-aminolevulinate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN20629_c0_g2_i2]]
+
* Gene: [[DN19512_c0_g1_i2]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN21553_c0_g1_i1]]
+
* Gene: [[DN19512_c0_g1_i6]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN21553_c0_g1_i4]]
+
* Gene: [[DN19512_c0_g1_i4]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN20467_c0_g1_i2]]
+
* Gene: [[DN19459_c0_g1_i2]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN21553_c0_g1_i6]]
+
* Gene: [[DN19512_c0_g1_i1]]
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN22046_c0_g2_i3]]
 
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN22046_c0_g2_i1]]
 
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6642]], (R)-cysteate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6642 PWY-6642]
+
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
−
** '''1''' reactions found over '''NA''' reactions in the full pathway
+
** '''5''' reactions found over '''NA''' reactions in the full pathway
−
* [[PWY-6638]], sulfolactate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6638 PWY-6638]
 
−
** '''1''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-6643]], coenzyme M biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6643 PWY-6643]
 
−
** '''1''' reactions found over '''NA''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 50: Line 40:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14265 14265]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02433 R02433]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02272 R02272]
−
{{#set: common name=cysteate aminotransferase}}
+
* UNIPROT:
−
{{#set: ec number=EC-2.6.1.1}}
+
** [http://www.uniprot.org/uniprot/P18492 P18492]
−
{{#set: direction=REVERSIBLE}}
+
** [http://www.uniprot.org/uniprot/P21267 P21267]
−
{{#set: gene associated=DN20629_c0_g2_i2|DN21553_c0_g1_i1|DN21553_c0_g1_i4|DN20467_c0_g1_i2|DN21553_c0_g1_i6|DN22046_c0_g2_i3|DN22046_c0_g2_i1}}
+
** [http://www.uniprot.org/uniprot/Q06741 Q06741]
−
{{#set: in pathway=PWY-6642|PWY-6638|PWY-6643}}
+
** [http://www.uniprot.org/uniprot/Q06774 Q06774]
 +
** [http://www.uniprot.org/uniprot/P23893 P23893]
 +
** [http://www.uniprot.org/uniprot/O26330 O26330]
 +
** [http://www.uniprot.org/uniprot/P30949 P30949]
 +
** [http://www.uniprot.org/uniprot/Q9PP70 Q9PP70]
 +
** [http://www.uniprot.org/uniprot/Q9JW10 Q9JW10]
 +
** [http://www.uniprot.org/uniprot/O29027 O29027]
 +
** [http://www.uniprot.org/uniprot/P45621 P45621]
 +
** [http://www.uniprot.org/uniprot/P24630 P24630]
 +
** [http://www.uniprot.org/uniprot/P31593 P31593]
 +
** [http://www.uniprot.org/uniprot/Q39566 Q39566]
 +
** [http://www.uniprot.org/uniprot/P48247 P48247]
 +
** [http://www.uniprot.org/uniprot/P46716 P46716]
 +
** [http://www.uniprot.org/uniprot/Q40147 Q40147]
 +
** [http://www.uniprot.org/uniprot/O74061 O74061]
 +
{{#set: common name=glutamate-1-semialdehyde aminotransferase}}
 +
{{#set: ec number=EC-5.4.3.8}}
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: gene associated=DN19512_c0_g1_i2|DN19512_c0_g1_i6|DN19512_c0_g1_i4|DN19459_c0_g1_i2|DN19512_c0_g1_i1}}
 +
{{#set: in pathway=PWY-5188}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:22, 15 January 2021

Reaction GSAAMINOTRANS-RXN

  • common name:
    • glutamate-1-semialdehyde aminotransferase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5188, tetrapyrrole biosynthesis I (from glutamate): PWY-5188
    • 5 reactions found over NA reactions in the full pathway

Reconstruction information

External links





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