Difference between revisions of "ASPARAGHYD-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2141 RXN0-2141] == * common name: ** β-keto-cis-Δ5-dodecenoyl-[acp] synthase * ec n...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGHYD-RXN ASPARAGHYD-RXN] == * common name: ** asparaginase * ec number: ** [http://enzyme.exp...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2141 RXN0-2141] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGHYD-RXN ASPARAGHYD-RXN] ==
 
* common name:
 
* common name:
−
** β-keto-cis-Δ5-dodecenoyl-[acp] synthase
+
** asparaginase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.179 EC-2.3.1.179]
+
** [http://enzyme.expasy.org/EC/3.5.1.38 EC-3.5.1.38]
−
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
** [http://enzyme.expasy.org/EC/3.5.1.1 EC-3.5.1.1]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
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== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Cis-delta-3-decenoyl-ACPs]][c] '''=>''' 1 [[b-Keto-cis-D5-dodecenoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c]
+
** 1 [[ASN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-ASPARTATE]][c] '''+''' 1 [[AMMONIUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a (3Z)-dec-3-enoyl-[acp][c] '''=>''' 1 a (5Z)-3-oxo-dodec-5-enoyl-[acp][c] '''+''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c]
+
** 1 L-asparagine[c] '''+''' 1 H2O[c] '''=>''' 1 L-aspartate[c] '''+''' 1 ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN18128_c0_g1_i1]]
+
* Gene: [[DN14830_c0_g2_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-862]], (5Z)-dodec-5-enoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-862 PWY0-862]
+
* [[ASPASN-PWY]], superpathway of L-aspartate and L-asparagine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ASPASN-PWY ASPASN-PWY]
−
** '''4''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-7858]], (5Z)-dodec-5-enoate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7858 PWY-7858]
 
 
** '''4''' reactions found over '''NA''' reactions in the full pathway
 
** '''4''' reactions found over '''NA''' reactions in the full pathway
 +
* [[ASPARAGINE-DEG1-PWY]], L-asparagine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY ASPARAGINE-DEG1-PWY]
 +
** '''1''' reactions found over '''NA''' reactions in the full pathway
 +
* [[ASPARAGINE-DEG1-PWY-1]], L-asparagine degradation III (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY-1 ASPARAGINE-DEG1-PWY-1]
 +
** '''2''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=β-keto-cis-Δ5-dodecenoyl-[acp] synthase}}
+
* RHEA:
−
{{#set: ec number=EC-2.3.1.179}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21017 21017]
−
{{#set: ec number=EC-2.3.1.41}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00485 R00485]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P06608 P06608]
 +
** [http://www.uniprot.org/uniprot/P26900 P26900]
 +
** [http://www.uniprot.org/uniprot/P43843 P43843]
 +
** [http://www.uniprot.org/uniprot/Q9V262 Q9V262]
 +
** [http://www.uniprot.org/uniprot/Q9JT73 Q9JT73]
 +
** [http://www.uniprot.org/uniprot/O25424 O25424]
 +
** [http://www.uniprot.org/uniprot/P37595 P37595]
 +
** [http://www.uniprot.org/uniprot/Q9ZLB9 Q9ZLB9]
 +
** [http://www.uniprot.org/uniprot/O34482 O34482]
 +
** [http://www.uniprot.org/uniprot/Q9V2K1 Q9V2K1]
 +
** [http://www.uniprot.org/uniprot/O57797 O57797]
 +
** [http://www.uniprot.org/uniprot/Q9PJ82 Q9PJ82]
 +
** [http://www.uniprot.org/uniprot/P30363 P30363]
 +
** [http://www.uniprot.org/uniprot/P30362 P30362]
 +
** [http://www.uniprot.org/uniprot/P30364 P30364]
 +
** [http://www.uniprot.org/uniprot/P38986 P38986]
 +
** [http://www.uniprot.org/uniprot/P50287 P50287]
 +
** [http://www.uniprot.org/uniprot/P11163 P11163]
 +
** [http://www.uniprot.org/uniprot/P50286 P50286]
 +
** [http://www.uniprot.org/uniprot/P87015 P87015]
 +
** [http://www.uniprot.org/uniprot/Q9UTS7 Q9UTS7]
 +
** [http://www.uniprot.org/uniprot/P00805 P00805]
 +
** [http://www.uniprot.org/uniprot/P0A962 P0A962]
 +
{{#set: common name=asparaginase}}
 +
{{#set: ec number=EC-3.5.1.38}}
 +
{{#set: ec number=EC-3.5.1.1}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN18128_c0_g1_i1}}
+
{{#set: gene associated=DN14830_c0_g2_i1}}
−
{{#set: in pathway=PWY0-862|PWY-7858}}
+
{{#set: in pathway=ASPASN-PWY|ASPARAGINE-DEG1-PWY|ASPARAGINE-DEG1-PWY-1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:22, 15 January 2021

Reaction ASPARAGHYD-RXN

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-asparagine[c] + 1 H2O[c] => 1 L-aspartate[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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