Difference between revisions of "GCVT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANYL-KIN-RXN GUANYL-KIN-RXN] == * common name: ** guanylate kinase * ec number: ** [http://enzyme...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVT-RXN GCVT-RXN] == * common name: ** aminomethyltransferase * ec number: ** [http://enzyme.expas...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANYL-KIN-RXN GUANYL-KIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVT-RXN GCVT-RXN] ==
 
* common name:
 
* common name:
−
** guanylate kinase
+
** aminomethyltransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.4.8 EC-2.7.4.8]
+
** [http://enzyme.expasy.org/EC/2.1.2.10 EC-2.1.2.10]
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[GMP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[GDP]][c]
+
** 1 [[AMINOMETHYLDIHYDROLIPOYL-GCVH]][c] '''+''' 1 [[THF-GLU-N]][c] '''<=>''' 1 [[DIHYDROLIPOYL-GCVH]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[AMMONIUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 GMP[c] '''=>''' 1 ADP[c] '''+''' 1 GDP[c]
+
** 1 a [glycine-cleavage complex H protein] N6-aminomethyldihydrolipoyl-L-lysine[c] '''+''' 1 a tetrahydrofolate[c] '''<=>''' 1 a [glycine-cleavage complex H protein] N6-dihydrolipoyl-L-lysine[c] '''+''' 1 a 5,10-methylene-tetrahydrofolate[c] '''+''' 1 ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN21201_c0_g1_i2]]
+
* Gene: [[DN22144_c2_g1_i6]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN17765_c0_g1_i1]]
+
* Gene: [[DN22144_c2_g1_i5]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN22144_c2_g1_i7]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN22144_c2_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221]
+
* [[GLYCLEAV-PWY]], glycine cleavage: [http://metacyc.org/META/NEW-IMAGE?object=GLYCLEAV-PWY GLYCLEAV-PWY]
−
** '''4''' reactions found over '''NA''' reactions in the full pathway
+
** '''3''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 32: Line 38:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20780 20780]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16945 16945]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00332 R00332]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04125 R04125]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9PNB8 Q9PNB8]
+
** [http://www.uniprot.org/uniprot/P25285 P25285]
−
** [http://www.uniprot.org/uniprot/Q9CEE3 Q9CEE3]
+
** [http://www.uniprot.org/uniprot/P28337 P28337]
−
** [http://www.uniprot.org/uniprot/Q9JT96 Q9JT96]
+
** [http://www.uniprot.org/uniprot/P27248 P27248]
−
** [http://www.uniprot.org/uniprot/P44310 P44310]
+
** [http://www.uniprot.org/uniprot/Q9UZP8 Q9UZP8]
−
** [http://www.uniprot.org/uniprot/P15454 P15454]
+
** [http://www.uniprot.org/uniprot/Q9JVP2 Q9JVP2]
−
** [http://www.uniprot.org/uniprot/P60546 P60546]
+
** [http://www.uniprot.org/uniprot/P48728 P48728]
−
** [http://www.uniprot.org/uniprot/P31006 P31006]
+
** [http://www.uniprot.org/uniprot/P49364 P49364]
−
** [http://www.uniprot.org/uniprot/P46195 P46195]
+
** [http://www.uniprot.org/uniprot/P49095 P49095]
−
** [http://www.uniprot.org/uniprot/Q16774 Q16774]
+
** [http://www.uniprot.org/uniprot/P49363 P49363]
−
** [http://www.uniprot.org/uniprot/P72648 P72648]
+
** [http://www.uniprot.org/uniprot/P54260 P54260]
−
** [http://www.uniprot.org/uniprot/Q6RHR9 Q6RHR9]
+
** [http://www.uniprot.org/uniprot/P49361 P49361]
−
** [http://www.uniprot.org/uniprot/Q9M681 Q9M681]
+
** [http://www.uniprot.org/uniprot/P49362 P49362]
−
{{#set: common name=guanylate kinase}}
+
** [http://www.uniprot.org/uniprot/O49954 O49954]
−
{{#set: ec number=EC-2.7.4.8}}
+
** [http://www.uniprot.org/uniprot/P93256 P93256]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
** [http://www.uniprot.org/uniprot/O32955 O32955]
−
{{#set: gene associated=DN21201_c0_g1_i2|DN17765_c0_g1_i1}}
+
{{#set: common name=aminomethyltransferase}}
−
{{#set: in pathway=PWY-7221}}
+
{{#set: ec number=EC-2.1.2.10}}
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: gene associated=DN22144_c2_g1_i6|DN22144_c2_g1_i5|DN22144_c2_g1_i7|DN22144_c2_g1_i1}}
 +
{{#set: in pathway=GLYCLEAV-PWY}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:22, 15 January 2021

Reaction GCVT-RXN

  • common name:
    • aminomethyltransferase
  • ec number:
  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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