Difference between revisions of "RXN-7716"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FADSYN-RXN FADSYN-RXN] == * common name: ** FMN adenylyltransferase * ec number: ** [http://enzyme....")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7716 RXN-7716] == * common name: ** dihydrolipoate dehydrogenase * ec number: ** [http://enzyme...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FADSYN-RXN FADSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7716 RXN-7716] ==
 
* common name:
 
* common name:
−
** FMN adenylyltransferase
+
** dihydrolipoate dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.7.2 EC-2.7.7.2]
+
** [http://enzyme.expasy.org/EC/1.8.1.4 EC-1.8.1.4]
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[FMN]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[FAD]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[Oxo-glutarate-dehydrogenase-DH-lipoyl]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Oxo-glutarate-dehydrogenase-lipoyl]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 FMN[c] '''+''' 1 ATP[c] '''=>''' 1 FAD[c] '''+''' 1 diphosphate[c]
+
** 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine[c] '''+''' 1 NAD+[c] '''<=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN19185_c0_g1_i2]]
+
* Gene: [[DN14244_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN16359_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN19118_c0_g2_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN19118_c0_g2_i2]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN9845_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN14244_c0_g1_i2]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167]
+
* [[PWY-5084]], 2-oxoglutarate decarboxylation to succinyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5084 PWY-5084]
−
** '''4''' reactions found over '''NA''' reactions in the full pathway
+
** '''3''' reactions found over '''NA''' reactions in the full pathway
−
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
 
−
** '''7''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
 
−
** '''5''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY66-366]], flavin biosynthesis IV (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-366 PWY66-366]
 
−
** '''2''' reactions found over '''NA''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 34: Line 43:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: common name=dihydrolipoate dehydrogenase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17238 17238]
+
{{#set: ec number=EC-1.8.1.4}}
−
* LIGAND-RXN:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00161 R00161]
+
{{#set: gene associated=DN14244_c0_g1_i1|DN16359_c0_g1_i1|DN19118_c0_g2_i1|DN19118_c0_g2_i2|DN9845_c0_g1_i1|DN14244_c0_g1_i2}}
−
* UNIPROT:
+
{{#set: in pathway=PWY-5084}}
−
** [http://www.uniprot.org/uniprot/Q9JVY5 Q9JVY5]
 
−
** [http://www.uniprot.org/uniprot/Q9PHS7 Q9PHS7]
 
−
** [http://www.uniprot.org/uniprot/Q59263 Q59263]
 
−
{{#set: common name=FMN adenylyltransferase}}
 
−
{{#set: ec number=EC-2.7.7.2}}
 
−
{{#set: direction=LEFT-TO-RIGHT}}
 
−
{{#set: gene associated=DN19185_c0_g1_i2}}
 
−
{{#set: in pathway=PWY-6167|RIBOSYN2-PWY|PWY-6168|PWY66-366}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:22, 15 January 2021

Reaction RXN-7716

  • common name:
    • dihydrolipoate dehydrogenase
  • ec number:
  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5084, 2-oxoglutarate decarboxylation to succinyl-CoA: PWY-5084
    • 3 reactions found over NA reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//ucomgem/index.php?title=RXN-7716&oldid=8828"