Difference between revisions of "4.2.1.61-RXN"
Jump to navigation
Jump to search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17917 RXN-17917] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.61-RXN 4.2.1.61-RXN] == * common name: ** (3R)-3-hydroxypalmitoyl-[acyl-carrier protein] dehy...") |
||
Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.61-RXN 4.2.1.61-RXN] == |
+ | * common name: | ||
+ | ** (3R)-3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase | ||
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86] | ||
+ | ** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85] | ||
+ | ** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59] | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* Synonym(s): | * Synonym(s): | ||
+ | ** D-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase | ||
+ | ** β-hydroxypalmitoyl-acyl carrier protein dehydrase | ||
+ | ** β-hydroxypalmitoyl thioester dehydratase | ||
+ | ** β-hydroxypalmityl-ACP dehydrase | ||
+ | ** (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase | ||
+ | ** (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming) | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[R-3-Hydroxypalmitoyl-ACPs]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[2-Hexadecenoyl-ACPs]][c] |
* With common name(s): | * With common name(s): | ||
− | ** | + | ** 1 a (3R)-3-hydroxypalmitoyl-[acp][c] '''=>''' 1 H2O[c] '''+''' 1 a trans hexadecenoyl-[acp][c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * Gene: [[ | + | * Gene: [[DN20375_c0_g1_i1]] |
** Source: [[annotation-transcriptome]] | ** Source: [[annotation-transcriptome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
− | * Gene: [[ | + | * Gene: [[DN20375_c0_g1_i4]] |
+ | ** Source: [[annotation-transcriptome]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[DN18128_c0_g1_i1]] | ||
+ | ** Source: [[annotation-transcriptome]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[DN13183_c0_g1_i1]] | ||
+ | ** Source: [[annotation-transcriptome]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[DN11444_c0_g1_i1]] | ||
+ | ** Source: [[annotation-transcriptome]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[DN20375_c0_g1_i2]] | ||
+ | ** Source: [[annotation-transcriptome]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[DN25390_c0_g1_i1]] | ||
+ | ** Source: [[annotation-transcriptome]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[DN6632_c0_g1_i1]] | ||
** Source: [[annotation-transcriptome]] | ** Source: [[annotation-transcriptome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
+ | * [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971] | ||
+ | ** '''27''' reactions found over '''NA''' reactions in the full pathway | ||
+ | * [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994] | ||
+ | ** '''27''' reactions found over '''NA''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
Line 25: | Line 59: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R04462 R04462] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P49327 P49327] | ||
+ | ** [http://www.uniprot.org/uniprot/P07149 P07149] | ||
+ | ** [http://www.uniprot.org/uniprot/P12276 P12276] | ||
+ | ** [http://www.uniprot.org/uniprot/P12785 P12785] | ||
+ | {{#set: common name=(3R)-3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase}} | ||
+ | {{#set: ec number=EC-2.3.1.86}} | ||
+ | {{#set: ec number=EC-2.3.1.85}} | ||
+ | {{#set: ec number=EC-4.2.1.59}} | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | {{#set: gene associated= | + | {{#set: common name=D-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase|β-hydroxypalmitoyl-acyl carrier protein dehydrase|β-hydroxypalmitoyl thioester dehydratase|β-hydroxypalmityl-ACP dehydrase|(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase|(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)}} |
− | {{#set: in pathway=}} | + | {{#set: gene associated=DN20375_c0_g1_i1|DN20375_c0_g1_i4|DN18128_c0_g1_i1|DN13183_c0_g1_i1|DN11444_c0_g1_i1|DN20375_c0_g1_i2|DN25390_c0_g1_i1|DN6632_c0_g1_i1}} |
+ | {{#set: in pathway=PWY-5971|PWY-5994}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-transcriptome}} | {{#set: reconstruction source=annotation-transcriptome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} |
Latest revision as of 14:22, 15 January 2021
Contents
Reaction 4.2.1.61-RXN
- common name:
- (3R)-3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase
- ec number:
- direction:
- LEFT-TO-RIGHT
- Synonym(s):
- D-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase
- β-hydroxypalmitoyl-acyl carrier protein dehydrase
- β-hydroxypalmitoyl thioester dehydratase
- β-hydroxypalmityl-ACP dehydrase
- (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase
- (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)
Reaction Formula
- With identifiers:
- 1 R-3-Hydroxypalmitoyl-ACPs[c] => 1 WATER[c] + 1 2-Hexadecenoyl-ACPs[c]
- With common name(s):
- 1 a (3R)-3-hydroxypalmitoyl-[acp][c] => 1 H2O[c] + 1 a trans hexadecenoyl-[acp][c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: DN20375_c0_g1_i1
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
- Gene: DN20375_c0_g1_i4
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
- Gene: DN18128_c0_g1_i1
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
- Gene: DN13183_c0_g1_i1
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
- Gene: DN11444_c0_g1_i1
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
- Gene: DN20375_c0_g1_i2
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
- Gene: DN25390_c0_g1_i1
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
- Gene: DN6632_c0_g1_i1
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
Pathways
- PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
- 27 reactions found over NA reactions in the full pathway
- PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
- 27 reactions found over NA reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-transcriptome
- Tool: pathwaytools
- Source: annotation-transcriptome
External links
Property "Common name" (as page type) with input value "(3R)-3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
- Property "Common name" (as page type) with input value "D-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
- Property "Common name" (as page type) with input value "(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
- Property "Common name" (as page type) with input value "(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.