Difference between revisions of "RXN-12878"
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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9660 RXN-9660] == * common name: ** trans-Δ2-decenoyl-[acp]-reductase ** decanoyl-[acyl-c...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12878 RXN-12878] == * common name: ** glutamate dehydrogenase (ferredoxin) * direction: ** LEFT...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12878 RXN-12878] == |
* common name: | * common name: | ||
| − | ** | + | ** glutamate dehydrogenase (ferredoxin) |
| − | |||
| − | |||
| − | |||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| Line 12: | Line 9: | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[GLT]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 2 [[PROTON]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 L-glutamate[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 2-oxoglutarate[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 2 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[DN21819_c0_g2_i1]] |
** Source: [[annotation-transcriptome]] | ** Source: [[annotation-transcriptome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 29: | Line 24: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | + | * RHEA: | |
| − | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32192 32192] | |
| − | {{#set: | + | * LIGAND-RXN: |
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R10086 R10086] | ||
| + | {{#set: common name=glutamate dehydrogenase (ferredoxin)}} | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: gene associated= | + | {{#set: gene associated=DN21819_c0_g2_i1}} |
| − | {{#set: in pathway= | + | {{#set: in pathway=}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-transcriptome}} | {{#set: reconstruction source=annotation-transcriptome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 14:22, 15 January 2021
Contents
Reaction RXN-12878
- common name:
- glutamate dehydrogenase (ferredoxin)
- direction:
- LEFT-TO-RIGHT
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 GLT[c] + 2 Oxidized-ferredoxins[c] + 1 WATER[c] => 1 AMMONIUM[c] + 1 2-KETOGLUTARATE[c] + 2 Reduced-ferredoxins[c] + 2 PROTON[c]
- With common name(s):
- 1 L-glutamate[c] + 2 an oxidized ferredoxin [iron-sulfur] cluster[c] + 1 H2O[c] => 1 ammonium[c] + 1 2-oxoglutarate[c] + 2 a reduced ferredoxin [iron-sulfur] cluster[c] + 2 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: DN21819_c0_g2_i1
- Source: annotation-transcriptome
- Assignment: EC-NUMBER
- Source: annotation-transcriptome
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-transcriptome
- Tool: pathwaytools
- Source: annotation-transcriptome
External links
