Difference between revisions of "RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-5-DEHYDROGENASE-RXN SHIKIMATE-5-DEHYDROGENASE-RXN] == * common name: ** shikimate dehydro...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN] == * common name: ** S...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-5-DEHYDROGENASE-RXN SHIKIMATE-5-DEHYDROGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN] ==
 
* common name:
 
* common name:
−
** shikimate dehydrogenase
+
** S-adenosyl-L-methionine:Mg-protoporphyrin IX methyltransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.25 EC-1.1.1.25]
+
** [http://enzyme.expasy.org/EC/2.1.1.11 EC-2.1.1.11]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
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== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[3-DEHYDRO-SHIKIMATE]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[SHIKIMATE]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[MG-PROTOPORPHYRIN]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[MG-PROTOPORPHYRIN-MONOMETHYL-ESTER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 3-dehydroshikimate[c] '''+''' 1 NADPH[c] '''=>''' 1 shikimate[c] '''+''' 1 NADP+[c]
+
** 1 S-adenosyl-L-methionine[c] '''+''' 1 Mg-protoporphyrin[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 magnesium-protoporphyrin IX 13-monomethyl ester[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN14706_c0_g1_i2]]
+
* Gene: [[DN19969_c0_g1_i2]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN14706_c0_g1_i1]]
+
* Gene: [[DN19969_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
+
* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN]
−
** '''4''' reactions found over '''NA''' reactions in the full pathway
+
** '''9''' reactions found over '''NA''' reactions in the full pathway
 +
* [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159]
 +
** '''8''' reactions found over '''NA''' reactions in the full pathway
 +
* [[PWY-5531]], 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5531 PWY-5531]
 +
** '''3''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17739 17739]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17810 17810]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02413 R02413]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04237 R04237]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P07547 P07547]
+
** [http://www.uniprot.org/uniprot/P26162 P26162]
−
** [http://www.uniprot.org/uniprot/P08566 P08566]
+
** [http://www.uniprot.org/uniprot/Q9RFD7 Q9RFD7]
−
** [http://www.uniprot.org/uniprot/Q58484 Q58484]
+
** [http://www.uniprot.org/uniprot/Q9RFD5 Q9RFD5]
−
** [http://www.uniprot.org/uniprot/Q9PIA0 Q9PIA0]
+
{{#set: common name=S-adenosyl-L-methionine:Mg-protoporphyrin IX methyltransferase}}
−
** [http://www.uniprot.org/uniprot/P0A6D5 P0A6D5]
+
{{#set: ec number=EC-2.1.1.11}}
−
** [http://www.uniprot.org/uniprot/Q9CES7 Q9CES7]
 
−
** [http://www.uniprot.org/uniprot/Q44606 Q44606]
 
−
** [http://www.uniprot.org/uniprot/Q44608 Q44608]
 
−
** [http://www.uniprot.org/uniprot/Q44609 Q44609]
 
−
** [http://www.uniprot.org/uniprot/Q44610 Q44610]
 
−
** [http://www.uniprot.org/uniprot/Q44611 Q44611]
 
−
** [http://www.uniprot.org/uniprot/Q44612 Q44612]
 
−
** [http://www.uniprot.org/uniprot/P15770 P15770]
 
−
** [http://www.uniprot.org/uniprot/Q42947 Q42947]
 
−
** [http://www.uniprot.org/uniprot/O65917 O65917]
 
−
{{#set: common name=shikimate dehydrogenase}}
 
−
{{#set: ec number=EC-1.1.1.25}}
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN14706_c0_g1_i2|DN14706_c0_g1_i1}}
+
{{#set: gene associated=DN19969_c0_g1_i2|DN19969_c0_g1_i1}}
−
{{#set: in pathway=PWY-6163}}
+
{{#set: in pathway=CHLOROPHYLL-SYN|PWY-7159|PWY-5531}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:22, 15 January 2021

Reaction RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN

  • common name:
    • S-adenosyl-L-methionine:Mg-protoporphyrin IX methyltransferase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • CHLOROPHYLL-SYN, 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): CHLOROPHYLL-SYN
    • 9 reactions found over NA reactions in the full pathway
  • PWY-7159, 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): PWY-7159
    • 8 reactions found over NA reactions in the full pathway
  • PWY-5531, 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): PWY-5531
    • 3 reactions found over NA reactions in the full pathway

Reconstruction information

External links





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