Difference between revisions of "RXN-14225"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.8-RXN 1.1.1.8-RXN] == * common name: ** glycerol 3-phosphate dehydrogenase * ec number: ** [h...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14225 RXN-14225] == * ec number: ** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3] * directio...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.8-RXN 1.1.1.8-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14225 RXN-14225] ==
−
* common name:
 
−
** glycerol 3-phosphate dehydrogenase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.8 EC-1.1.1.8]
+
** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
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== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[NAD]][c]
+
** 1 [[D-GLUCURONOLACTONE]][c] '''+''' 1 [[NAD]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[D-GLUCARATE]][c] '''+''' 1 [[NADH]][c] '''+''' 3 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 glycerone phosphate[c] '''+''' 1 NADH[c] '''+''' 1 H+[c] '''=>''' 1 sn-glycerol 3-phosphate[c] '''+''' 1 NAD+[c]
+
** 1 D-glucurono-6,3-lactone[c] '''+''' 1 NAD+[c] '''+''' 2 H2O[c] '''=>''' 1 D-glucarate[c] '''+''' 1 NADH[c] '''+''' 3 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN17685_c0_g1_i1]]
+
* Gene: [[DN7759_c0_g1_i1]]
−
** Source: [[annotation-transcriptome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[DN12632_c0_g1_i1]]
 
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385]
 
−
** '''4''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-6118]], glycerol-3-phosphate shuttle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6118 PWY-6118]
 
−
** '''2''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-7411]], phosphatidate biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7411 PWY-7411]
 
−
** '''1''' reactions found over '''NA''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 35: Line 24:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30886 30886]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00842 R00842]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02957 R02957]
−
* UNIPROT:
+
{{#set: ec number=EC-1.2.1.3}}
−
** [http://www.uniprot.org/uniprot/P13707 P13707]
 
−
** [http://www.uniprot.org/uniprot/P08507 P08507]
 
−
** [http://www.uniprot.org/uniprot/O25614 O25614]
 
−
** [http://www.uniprot.org/uniprot/Q9JWH0 Q9JWH0]
 
−
** [http://www.uniprot.org/uniprot/P43798 P43798]
 
−
** [http://www.uniprot.org/uniprot/O29390 O29390]
 
−
** [http://www.uniprot.org/uniprot/P46919 P46919]
 
−
** [http://www.uniprot.org/uniprot/P07735 P07735]
 
−
** [http://www.uniprot.org/uniprot/P13706 P13706]
 
−
** [http://www.uniprot.org/uniprot/Q00055 Q00055]
 
−
** [http://www.uniprot.org/uniprot/P34517 P34517]
 
−
** [http://www.uniprot.org/uniprot/P0A6S7 P0A6S7]
 
−
** [http://www.uniprot.org/uniprot/P21695 P21695]
 
−
** [http://www.uniprot.org/uniprot/P41911 P41911]
 
−
** [http://www.uniprot.org/uniprot/P90593 P90593]
 
−
{{#set: common name=glycerol 3-phosphate dehydrogenase}}
 
−
{{#set: ec number=EC-1.1.1.8}}
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN17685_c0_g1_i1|DN12632_c0_g1_i1}}
+
{{#set: gene associated=DN7759_c0_g1_i1}}
−
{{#set: in pathway=PWY-7385|PWY-6118|PWY-7411}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:22, 15 January 2021

Reaction RXN-14225

  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.genouest.org//ucomgem/index.php?title=RXN-14225&oldid=8977"