Difference between revisions of "RXN-9530"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAMPYR-RXN PSERTRANSAMPYR-RXN] == * common name: ** phosphohydroxythreonine aminotransferas...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9530 RXN-9530] == * common name: ** trans-Δ2-decenoyl-[acp]reductase (NADPH, B-specific)...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAMPYR-RXN PSERTRANSAMPYR-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9530 RXN-9530] ==
 
* common name:
 
* common name:
−
** phosphohydroxythreonine aminotransferase
+
** trans-Δ2-decenoyl-[acp]reductase (NADPH, B-specific)
 +
** decanoyl-[acp] reductase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.6.1.52 EC-2.6.1.52]
+
** [http://enzyme.expasy.org/EC/1.3.1.10 EC-1.3.1.10]
 +
** [http://enzyme.expasy.org/EC/1.3.1.39 EC-1.3.1.39]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[3OH-4P-OH-ALPHA-KETOBUTYRATE]][c] '''+''' 1 [[GLT]][c] '''<=>''' 1 [[4-PHOSPHONOOXY-THREONINE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c]
+
** 1 [[Trans-D2-decenoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Decanoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate[c] '''+''' 1 L-glutamate[c] '''<=>''' 1 4-phosphooxy-L-threonine[c] '''+''' 1 2-oxoglutarate[c]
+
** 1 a (2E)-dec-2-enoyl-[acp][c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 a decanoyl-[acp][c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN18650_c0_g1_i1]]
+
* Gene: [[DN11444_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN20375_c0_g1_i2]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN25390_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN13183_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN20375_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN20375_c0_g1_i4]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN6632_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN18128_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PYRIDOXSYN-PWY]], pyridoxal 5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXSYN-PWY PYRIDOXSYN-PWY]
+
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
−
** '''2''' reactions found over '''NA''' reactions in the full pathway
+
** '''27''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: common name=trans-&Delta;2-decenoyl-[acp]reductase (NADPH, B-specific)}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16576 16576]
+
{{#set: common name=decanoyl-[acp] reductase}}
−
* LIGAND-RXN:
+
{{#set: ec number=EC-1.3.1.10}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R05085 R05085]
+
{{#set: ec number=EC-1.3.1.39}}
−
{{#set: common name=phosphohydroxythreonine aminotransferase}}
+
{{#set: ec number=EC-2.3.1.85}}
−
{{#set: ec number=EC-2.6.1.52}}
+
{{#set: ec number=EC-2.3.1.86}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN18650_c0_g1_i1}}
+
{{#set: gene associated=DN11444_c0_g1_i1|DN20375_c0_g1_i2|DN25390_c0_g1_i1|DN13183_c0_g1_i1|DN20375_c0_g1_i1|DN20375_c0_g1_i4|DN6632_c0_g1_i1|DN18128_c0_g1_i1}}
−
{{#set: in pathway=PYRIDOXSYN-PWY}}
+
{{#set: in pathway=PWY-5994}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:22, 15 January 2021

Reaction RXN-9530

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 27 reactions found over NA reactions in the full pathway

Reconstruction information

External links

Property "Common name" (as page type) with input value "trans-Δ2-decenoyl-[acp]reductase (NADPH, B-specific)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Common name" (as page type) with input value "decanoyl-[acp] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.






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