Difference between revisions of "3.1.1.64-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OXALODECARB-RXN OXALODECARB-RXN] == * common name: ** oxaloacetate decarboxylase * ec number: ** [h...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.1.64-RXN 3.1.1.64-RXN] == * common name: ** all-trans-retinyl-palmitate hydrolase * ec number:...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OXALODECARB-RXN OXALODECARB-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.1.64-RXN 3.1.1.64-RXN] ==
 
* common name:
 
* common name:
−
** oxaloacetate decarboxylase
+
** all-trans-retinyl-palmitate hydrolase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.40 EC-1.1.1.40]
+
** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
−
** [http://enzyme.expasy.org/EC/4.1.1.3 EC-4.1.1.3]
 
−
** [http://enzyme.expasy.org/EC/1.1.1.38 EC-1.1.1.38]
 
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
Line 13: Line 11:
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[CHOCOLA_A]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-13524]][c] '''+''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 oxaloacetate[c] '''+''' 1 H+[c] '''=>''' 1 pyruvate[c] '''+''' 1 CO2[c]
+
** 1 all-trans-retinyl palmitate[c] '''+''' 1 H2O[c] '''=>''' 1 all-trans-retinol[c] '''+''' 1 palmitate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN19199_c1_g1_i2]]
+
* Gene: [[DN6362_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN18974_c0_g1_i1]]
+
* Gene: [[DN18337_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN16931_c0_g1_i1]]
+
* Gene: [[DN17728_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN21016_c0_g1_i3]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN3811_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN8032_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN17624_c0_g1_i2]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN19423_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN20917_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN6502_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN16008_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN21016_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN15083_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN22969_c0_g1_i2]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN19536_c0_g1_i2]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN19888_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN15032_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN22077_c0_g1_i2]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN19536_c0_g1_i6]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN12569_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN20917_c0_g2_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN22077_c0_g1_i3]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN22077_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN19423_c0_g1_i2]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[METHYLGALLATE-DEGRADATION-PWY]], methylgallate degradation: [http://metacyc.org/META/NEW-IMAGE?object=METHYLGALLATE-DEGRADATION-PWY METHYLGALLATE-DEGRADATION-PWY]
 
−
** '''2''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[P184-PWY]], protocatechuate degradation I (meta-cleavage pathway): [http://metacyc.org/META/NEW-IMAGE?object=P184-PWY P184-PWY]
 
−
** '''2''' reactions found over '''NA''' reactions in the full pathway
 
−
* [[PWY-6339]], syringate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6339 PWY-6339]
 
−
** '''2''' reactions found over '''NA''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 41: Line 96:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15642 15642]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13933 13933]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00217 R00217]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02368 R02368]
−
* UNIPROT:
+
{{#set: common name=all-trans-retinyl-palmitate hydrolase}}
−
** [http://www.uniprot.org/uniprot/P13187 P13187]
+
{{#set: ec number=EC-3.1.1.1}}
−
** [http://www.uniprot.org/uniprot/P13155 P13155]
 
−
** [http://www.uniprot.org/uniprot/P13156 P13156]
 
−
** [http://www.uniprot.org/uniprot/Q58628 Q58628]
 
−
{{#set: common name=oxaloacetate decarboxylase}}
 
−
{{#set: ec number=EC-1.1.1.40}}
 
−
{{#set: ec number=EC-4.1.1.3}}
 
−
{{#set: ec number=EC-1.1.1.38}}
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN19199_c1_g1_i2|DN18974_c0_g1_i1|DN16931_c0_g1_i1}}
+
{{#set: gene associated=DN6362_c0_g1_i1|DN18337_c0_g1_i1|DN17728_c0_g1_i1|DN21016_c0_g1_i3|DN3811_c0_g1_i1|DN8032_c0_g1_i1|DN17624_c0_g1_i2|DN19423_c0_g1_i1|DN20917_c0_g1_i1|DN6502_c0_g1_i1|DN16008_c0_g1_i1|DN21016_c0_g1_i1|DN15083_c0_g1_i1|DN22969_c0_g1_i2|DN19536_c0_g1_i2|DN19888_c0_g1_i1|DN15032_c0_g1_i1|DN22077_c0_g1_i2|DN19536_c0_g1_i6|DN12569_c0_g1_i1|DN20917_c0_g2_i1|DN22077_c0_g1_i3|DN22077_c0_g1_i1|DN19423_c0_g1_i2}}
−
{{#set: in pathway=METHYLGALLATE-DEGRADATION-PWY|P184-PWY|PWY-6339}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:22, 15 January 2021

Reaction 3.1.1.64-RXN

  • common name:
    • all-trans-retinyl-palmitate hydrolase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans-retinyl palmitate[c] + 1 H2O[c] => 1 all-trans-retinol[c] + 1 palmitate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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