Difference between revisions of "DUDPKIN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DISULISOM-RXN DISULISOM-RXN] == * common name: ** protein disulfide-isomerase * ec number: ** [http...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DUDPKIN-RXN DUDPKIN-RXN] == * common name: ** dUDP kinase * ec number: ** [http://enzyme.expasy.org...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DISULISOM-RXN DISULISOM-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DUDPKIN-RXN DUDPKIN-RXN] ==
 
* common name:
 
* common name:
−
** protein disulfide-isomerase
+
** dUDP kinase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/5.3.4.1 EC-5.3.4.1]
+
** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[General-Protein-Substrates]][c] '''<=>''' 1 [[General-Protein-Substrates]][c]
+
** 1 [[DUDP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[DUTP]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a protein[c] '''<=>''' 1 a protein[c]
+
** 1 dUDP[c] '''+''' 1 ATP[c] '''=>''' 1 dUTP[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN6565_c0_g1_i1]]
+
* Gene: [[DN17885_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN21894_c0_g1_i1]]
+
* Gene: [[DN20568_c0_g1_i2]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN21894_c0_g1_i2]]
+
* Gene: [[DN8917_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
 +
** '''12''' reactions found over '''NA''' reactions in the full pathway
 +
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
 +
** '''8''' reactions found over '''NA''' reactions in the full pathway
 +
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
 +
** '''9''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 32: Line 38:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=protein disulfide-isomerase}}
+
* RHEA:
−
{{#set: ec number=EC-5.3.4.1}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28583 28583]
−
{{#set: direction=REVERSIBLE}}
+
* LIGAND-RXN:
−
{{#set: gene associated=DN6565_c0_g1_i1|DN21894_c0_g1_i1|DN21894_c0_g1_i2}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02331 R02331]
−
{{#set: in pathway=}}
+
{{#set: common name=dUDP kinase}}
 +
{{#set: ec number=EC-2.7.4.6}}
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: gene associated=DN17885_c0_g1_i1|DN20568_c0_g1_i2|DN8917_c0_g1_i1}}
 +
{{#set: in pathway=PWY0-166|PWY-6545|PWY-7184}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:23, 15 January 2021

Reaction DUDPKIN-RXN

  • common name:
    • dUDP kinase
  • ec number:
  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dUDP[c] + 1 ATP[c] => 1 dUTP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): PWY0-166
    • 12 reactions found over NA reactions in the full pathway
  • PWY-6545, pyrimidine deoxyribonucleotides de novo biosynthesis III: PWY-6545
    • 8 reactions found over NA reactions in the full pathway
  • PWY-7184, pyrimidine deoxyribonucleotides de novo biosynthesis I: PWY-7184
    • 9 reactions found over NA reactions in the full pathway

Reconstruction information

External links





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