Difference between revisions of "RXN-9652"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15733 RXN-15733] == * common name: ** 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase * ec...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9652 RXN-9652] == * common name: ** 3-oxo-dodecanoyl-[acyl-carrier protein] synthase * ec numbe...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15733 RXN-15733] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9652 RXN-9652] ==
 
* common name:
 
* common name:
−
** 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase
+
** 3-oxo-dodecanoyl-[acyl-carrier protein] synthase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.6.3 EC-2.7.6.3]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
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== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-16953]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[CPD-16954]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[Decanoyl-ACPs]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-dodecanoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin[c] '''+''' 1 ATP[c] '''=>''' 1 [1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 H+[c]
+
** 1 a decanoyl-[acp][c] '''+''' 1 malonyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 a 3-oxo-dodecanoyl-[acp][c] '''+''' 1 CO2[c] '''+''' 1 coenzyme A[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[DN20845_c0_g1_i4]]
+
* Gene: [[DN20375_c0_g1_i1]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[DN20845_c0_g1_i2]]
+
* Gene: [[DN25390_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN18128_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN11444_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN6632_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN20375_c0_g1_i4]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN13183_c0_g1_i1]]
 +
** Source: [[annotation-transcriptome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[DN20375_c0_g1_i2]]
 
** Source: [[annotation-transcriptome]]
 
** Source: [[annotation-transcriptome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6148]], tetrahydromethanopterin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6148 PWY-6148]
+
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
−
** '''1''' reactions found over '''NA''' reactions in the full pathway
+
** '''27''' reactions found over '''NA''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase}}
+
{{#set: common name=3-oxo-dodecanoyl-[acyl-carrier protein] synthase}}
−
{{#set: ec number=EC-2.7.6.3}}
+
{{#set: ec number=EC-2.3.1.86}}
 +
{{#set: ec number=EC-2.3.1.85}}
 +
{{#set: ec number=EC-2.3.1.41}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=DN20845_c0_g1_i4|DN20845_c0_g1_i2}}
+
{{#set: gene associated=DN20375_c0_g1_i1|DN25390_c0_g1_i1|DN18128_c0_g1_i1|DN11444_c0_g1_i1|DN6632_c0_g1_i1|DN20375_c0_g1_i4|DN13183_c0_g1_i1|DN20375_c0_g1_i2}}
−
{{#set: in pathway=PWY-6148}}
+
{{#set: in pathway=PWY-5994}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction source=annotation-transcriptome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:23, 15 January 2021

Reaction RXN-9652

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 27 reactions found over NA reactions in the full pathway

Reconstruction information

External links

Property "Common name" (as page type) with input value "3-oxo-dodecanoyl-[acyl-carrier protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





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