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Automatic reconstruction with AuReMe

Model summary: summary

Download AuReMe Input/Output [LINK OR MEDIA data]

The automatic reconstruction of Ulva compressa results to a Genome scale Model containing 1117 reactions, 1391 metabolites, 1286 genes and 741 pathways. This GeM was obtained based on the following sources:

• Based on annotation data:
  • Tool: Pathway tools
    • Creation of a metabolic network containing 1117 reactions
• Based on orthology data:
  • Tool: Pantograph

Collaborative curation

• Suggest reactions to add or remove:
  • Download this form
• Suggest new reactions to create and add:
  • Download this form
• Follow the examples given in the form(s) to correctly share your suggestions
• Send the filled form(s) to: gem-aureme[at]inria.fr