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 Common nameEc numberReconstruction categoryReconstruction toolReconstruction sourceReconstruction commentGene associatedIn pathway
MANNPDEHYDROG-RXNEC-1.1.1.17ManualManual-reactions to addIs an essential reaction of e.siliculosusPWY-6531
MANNIDEG-PWY
Palythene hydrolysisManualManual-pathmodel inference new rxnCarreto2011
RXN-17368EC-6.3.4Gap-filling
Manual
MenecoGap-filling-gapfilling solution with meneco draft medium
Manual-pathmodel inference
Added for gapfilling
Meneco;brawley2017;tblastn
Scaffold115 51547 52668PWY-7751
RXN-17371EC-6.3.2Gap-filling
Manual
MenecoGap-filling-gapfilling solution with meneco draft medium
Manual-pathmodel inference
Added for gapfilling
Meneco;brawley2017;tblastn
Scaffold115 53074 54093
RXN-17372EC-4.2.3.154Gap-filling
Manual
MenecoGap-filling-gapfilling solution with meneco draft medium
Manual-pathmodel inference
Added for gapfilling
Dhq synthase domain;meneco;brawley2017
CHC T00001829001PWY-7751
RXN-17896EC-2.1.1Gap-filling
Manual
MenecoGap-filling-gapfilling solution with meneco draft medium
Manual-pathmodel inference
Added for gapfilling
Methyltransf 3 domain;meneco;brawley2017
CHC T00001829001PWY-7751
RXN-4222ManualManual-reactions to add 2Delta24 25 reduction;pathmodelCHC T00002789001PWY-2541
RXN-4243EC-1.14.19.41ManualManual-reactions to add 2C22 desaturation;pathmodelPWY-2541
RXN-708EC-1.3ManualManual-reactions to add 2Delta24 25 reduction;pathmodelCHC T00002789001PWY-2541
SQUALENE-MONOOXYGENASE-RXNEC-1.14.14.17ManualManual-pathmodel inferenceTblastn plus rnaseq evidenceScaffold90 7511 6165
Scaffold20 461442 460650
Scaffold57 152407 364140
PWY-6098
PWY-5670
Serine-threonine dehydration ASTERINA-330ManualManual-pathmodel inference new rxnCarreto2011;ab initioCHC T00009480001
Serine-threonine dehydration MAA2ManualManual-pathmodel inference new rxnCarreto2011;ab initioCHC T00009480001
Transport BIOMASSManualManual-biomass reactionTransport biomass to external compartment
TransportSeed ADENOSYLCOBALAMINManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed AMMONIAManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed BIOTINManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed CA+2ManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed CARBON-DIOXIDEManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed CL-ManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed CO+2ManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed COB-I-ALAMINManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed CPD-3ManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed CPD-315ManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed CU+ManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed CU+2ManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed EDTAManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed FE+2ManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed FE+3ManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed K+ManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed LightManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed MG+2ManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed MN+2ManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed NA+ManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed NITRATEManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed OXYGEN-MOLECULEManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed PROTONManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed SULFATEManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed THIAMINEManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed WATERManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment
TransportSeed ZN+2ManualManual-import from mediumAdded to manage seeds from extracellular to cytosol compartment