AGMATINE-DEIMINASE-RXN

Reaction AGMATINE-DEIMINASE-RXN

• common-name:
  • agmatine deaminase
• direction:
  • left-to-right
• ec-number:
  • ec-3.5.3.12

Reaction formula

• 1 AGMATHINE[c] + 1 WATER[c] => 1 AMMONIUM[c] + 1 CPD-597[c]

Gene(s) associated with this reaction

• Gene: g10162.t1
  • Category: annotation
    • Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
  • Category: orthology
    • Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
    • Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
• Gene: g10162.t2
  • Category: annotation
    • Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
  • Category: orthology
    • Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
    • Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
    • Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
    • Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a

Pathway(s)

• PWY-43, putrescine biosynthesis II:
  • 3 reactions found over 3 reactions in the full pathway
• ARGDEG-III-PWY, L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway):
  • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

• category: orthology; source: output_pantograph_saccharina_japonica; tool: pantograph; comment: n.a
• category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
• category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
• category: annotation; source: cladosiphon_okamuranus; tool: pathwaytools; comment: n.a

External links

• METANETX-RXN : MNXR95529
• RHEA:
  • 18038
• LIGAND-RXN:
  • R01416