IGPSYN-RXN

Reaction IGPSYN-RXN

• common-name:
  • indole-3-glycerol phosphate synthase
  • indole-3-glycerol-phosphate synthase
• direction:
  • left-to-right
• ec-number:
  • ec-4.1.1.48

Reaction formula

• 1 CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P[c] + 1 PROTON[c] => 1 CARBON-DIOXIDE[c] + 1 INDOLE-3-GLYCEROL-P[c] + 1 WATER[c]

Gene(s) associated with this reaction

• Gene: g9730.t1
  • Category: annotation
    • Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
  • Category: orthology
    • Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
    • Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
• Gene: g9731.t1
  • Category: annotation
    • Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
• Gene: g7793.t1
  • Category: annotation
    • Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
  • Category: orthology
    • Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
    • Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
• Gene: g9730.t2
  • Category: annotation
    • Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
  • Category: orthology
    • Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
    • Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
• Gene: g9429.t1
  • Category: annotation
    • Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
  • Category: orthology
    • Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
    • Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
• Gene: g13447.t1
  • Category: annotation
    • Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
  • Category: orthology
    • Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
    • Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
    • Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a

Pathway(s)

• TRPSYN-PWY, L-tryptophan biosynthesis:
  • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

• category: orthology; source: output_pantograph_saccharina_japonica; tool: pantograph; comment: n.a
• category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
• category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
• category: annotation; source: cladosiphon_okamuranus; tool: pathwaytools; comment: n.a
• category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a

External links

• METANETX-RXN : MNXR100814
• RHEA:
  • 23477
• LIGAND-RXN:
  • R03508
• UNIPROT:
  • P42393
  • P20577
  • P18304
  • Q06121
  • Q9V1G3
  • P20578
  • Q9PI11
  • Q58328
  • Q9JSN4
  • P03964
  • P00910
  • P00909
  • P00911
  • P17217
  • P20409
  • P00937
  • P00908
  • P05328
  • P06531
  • P18483
  • P25170
  • P26938
  • P24773
  • Q01999
  • Q9YGB5
  • Q9S591
  • Q9X7C7
  • Q92370
  • Q9ZFA7
  • P94327