http://gem-aureme.genouest.org//cokagem/index.php?title=RXN-9523&feed=atom&action=history
RXN-9523 - Revision history
2024-03-29T16:03:52Z
Revision history for this page on the wiki
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http://gem-aureme.genouest.org//cokagem/index.php?title=RXN-9523&diff=6674&oldid=prev
Bot 1: Created page with "Category:reaction == Reaction RXN-9523 == * common-name: ** 3-oxo-octanoyl-[acyl-carrier protein] synthase ** 3-oxoacyl-[acyl-carrier-protein] synthase * direction: ** lef..."
2021-06-15T10:42:48Z
<p>Created page with "<a href="/cokagem/index.php/Category:Reaction" title="Category:Reaction">Category:reaction</a> == Reaction RXN-9523 == * common-name: ** 3-oxo-octanoyl-[acyl-carrier protein] synthase ** 3-oxoacyl-[acyl-carrier-protein] synthase * direction: ** lef..."</p>
<p><b>New page</b></p><div>[[Category:reaction]]<br />
== Reaction RXN-9523 ==<br />
* common-name:<br />
** 3-oxo-octanoyl-[acyl-carrier protein] synthase<br />
** 3-oxoacyl-[acyl-carrier-protein] synthase<br />
* direction:<br />
** left-to-right<br />
* ec-number:<br />
** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179]<br />
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]<br />
== Reaction formula ==<br />
* 1 [[Hexanoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-Oxo-octanoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]<br />
== Gene(s) associated with this reaction ==<br />
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"><br />
* Gene: [[g16194.t1]]<br />
** Category: [[annotation]]<br />
*** Source: [[cladosiphon_okamuranus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br />
** Category: [[orthology]]<br />
*** Source: [[output_pantograph_saccharina_japonica]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a<br />
* Gene: [[g5720.t1]]<br />
** Category: [[annotation]]<br />
*** Source: [[cladosiphon_okamuranus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br />
* Gene: [[g11727.t1]]<br />
** Category: [[annotation]]<br />
*** Source: [[cladosiphon_okamuranus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br />
** Category: [[orthology]]<br />
*** Source: [[output_pantograph_saccharina_japonica]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a<br />
* Gene: [[g11727.t2]]<br />
** Category: [[annotation]]<br />
*** Source: [[cladosiphon_okamuranus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br />
** Category: [[orthology]]<br />
*** Source: [[output_pantograph_saccharina_japonica]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a<br />
* Gene: [[g9384.t1]]<br />
** Category: [[orthology]]<br />
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a<br />
*** Source: [[output_pantograph_saccharina_japonica]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a<br />
* Gene: [[g4145.t1]]<br />
** Category: [[annotation]]<br />
*** Source: [[cladosiphon_okamuranus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br />
** Category: [[orthology]]<br />
*** Source: [[output_pantograph_saccharina_japonica]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a<br />
* Gene: [[g9383.t1]]<br />
** Category: [[annotation]]<br />
*** Source: [[cladosiphon_okamuranus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br />
** Category: [[orthology]]<br />
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a<br />
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a<br />
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a<br />
*** Source: [[output_pantograph_saccharina_japonica]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a<br />
</div><br />
== Pathway(s) ==<br />
* [[PWY-5971]], palmitate biosynthesis (type II fatty acid synthase):<br />
** '''31''' reactions found over '''31''' reactions in the full pathway<br />
== Reconstruction information ==<br />
* category: [[annotation]]; source: [[cladosiphon_okamuranus]]; tool: [[pathwaytools]]; comment: n.a<br />
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a<br />
* category: [[orthology]]; source: [[output_pantograph_saccharina_japonica]]; tool: [[pantograph]]; comment: n.a<br />
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a<br />
== External links ==<br />
* LIGAND-RXN:<br />
** [http://www.genome.jp/dbget-bin/www_bget?R04957 R04957]<br />
* METANETX-RXN : MNXR109248<br />
{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] synthase|3-oxo-octanoyl-[acyl-carrier protein] synthase}}<br />
{{#set: direction=left-to-right}}<br />
{{#set: ec-number=ec-2.3.1.41|ec-2.3.1.179}}<br />
{{#set: nb gene associated=7}}<br />
{{#set: nb pathway associated=1}}<br />
{{#set: reconstruction category=annotation|orthology}}<br />
{{#set: reconstruction tool=pathwaytools|pantograph}}<br />
{{#set: reconstruction comment=n.a}}<br />
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|cladosiphon_okamuranus|output_pantograph_arabidopsis_thaliana|output_pantograph_saccharina_japonica}}</div>
Bot 1